Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q3TGA3 (Q3TGA3_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Afp MGI 87951
OrganismMus musculus (Mouse) EMBL BAE40645.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length578 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAE40645.1

Sequences

Sequence LengthMass (Da)Tools
Q3TGA3 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: C678EF5D63024C50

FASTA57864,317
        10         20         30         40         50         60 
IASTLDSSQC VTEKNVLSIA TITFTQFVPE ATEEEVNKMT SDVLAAMKKN SGDGCLESQL 

        70         80         90        100        110        120 
SVFLDEICHE TELSNKYGLS GCCSQSGVER HQCLLARKKT APASVPPFQF PEPAESCKAH 

       130        140        150        160        170        180 
EENRAVFMNR FIYEVSRRNP FMYAPAILSL AAQYDKVVLA CCKADNKEEC FQTKRASIAK 

       190        200        210        220        230        240 
ELREGSMLNE HVCSVIRKFG SRNLQATTII KLSQKLTEAN FTEIQKLALD VAHIHEECCQ 

       250        260        270        280        290        300 
GNSLECLQDG EKVMTYICSQ QNILSSKIAE CCKLPMIQLG FCIIHAENGV KPEGLSLNPS 

       310        320        330        340        350        360 
QFLGDRNFAQ FSSEEKIMFM ASFLHEYSRT HPNLPVSVIL RIAKTYQEIL EKCSQSGNLP 

       370        380        390        400        410        420 
GCQDNLEEEL QKHIEESQAL SKQSCALYQT LGDYKLQNLF LIGYTRKAPQ LTSAELIDLT 

       430        440        450        460        470        480 
GKMVSIASTC CQLSEEKWSG CGEGMADIFI GHLCIRNEAS PVNSGISHCC NSSYSNRRLC 

       490        500        510        520        530        540 
ITSFLRDETY APPPFSEDKF IFHKDLCQAQ GKALQTMKQE LLINLVKQKP ELTEEQLAAV 

       550        560        570 
TADFSGLLEK CCKAQDQEVC FTEEGPKLIS KTRDALGV 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE40645.1.
Tissue: Amnion EMBL BAE40645.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE40645.1.
Tissue: Amnion EMBL BAE40645.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE40645.1.
Tissue: Amnion EMBL BAE40645.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE40645.1.
Tissue: Amnion EMBL BAE40645.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE40645.1.
Tissue: Amnion EMBL BAE40645.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE40645.1.
Tissue: Amnion EMBL BAE40645.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE40645.1.
Tissue: Amnion EMBL BAE40645.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE40645.1.
Tissue: Amnion EMBL BAE40645.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK168818 mRNA. Translation: BAE40645.1.
UniGeneMm.358570.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:87951. Afp.

Phylogenomic databases

HOVERGENHBG004207.
InParanoidQ3TGA3.

Gene expression databases

ArrayExpressQ3TGA3.
BgeeQ3TGA3.
GenevestigatorQ3TGA3.

Family and domain databases

InterProIPR000264. ALB/AFP/VDB.
IPR001703. Alpha-fetoprotein.
IPR020858. Serum_albumin-like.
IPR021177. Serum_albumin/AFP.
IPR020857. Serum_albumin_CS.
IPR014760. Serum_albumin_N.
[Graphical view]
PfamPF00273. Serum_albumin. 3 hits.
[Graphical view]
PIRSFPIRSF002520. Serum_albumin_subgroup. 1 hit.
PRINTSPR00803. AFETOPROTEIN.
PR00802. SERUMALBUMIN.
SMARTSM00103. ALBUMIN. 3 hits.
[Graphical view]
SUPFAMSSF48552. SSF48552. 3 hits.
PROSITEPS00212. ALBUMIN_1. 2 hits.
PS51438. ALBUMIN_2. 3 hits.
[Graphical view]
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ3TGA3_MOUSE
AccessionPrimary (citable) accession number: Q3TGA3
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: April 16, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)