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Q3TFZ4

- Q3TFZ4_MOUSE

UniProt

Q3TFZ4 - Q3TFZ4_MOUSE

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Protein
Submitted name: Protein Zfp7
Gene
Zfp7, mCG_142392
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. nucleic acid binding Source: InterPro
  3. sequence-specific DNA binding transcription factor activity Source: RefGenome

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: RefGenome
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Zfp7Imported
Submitted name:
Zinc finger protein 7, isoform CRA_aImported
Gene namesi
Name:Zfp7Imported
ORF Names:mCG_142392Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 15

Organism-specific databases

MGIiMGI:99208. Zfp7.

Subcellular locationi

GO - Cellular componenti

  1. intracellular Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ3TFZ4.

Family & Domainsi

Keywords - Domaini

RepeatSAAS annotations, Zinc-fingerSAAS annotations

Phylogenomic databases

GeneTreeiENSGT00750000117300.
HOGENOMiHOG000234617.
HOVERGENiHBG018163.
InParanoidiQ3TFZ4.
KOiK09228.
OMAiNALEGST.
OrthoDBiEOG7KSX7Q.
TreeFamiTF341817.

Family and domain databases

Gene3Di3.30.160.60. 16 hits.
InterProiIPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF01352. KRAB. 1 hit.
PF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 16 hits.
[Graphical view]
SUPFAMiSSF109640. SSF109640. 1 hit.
PROSITEiPS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 16 hits.
PS50157. ZINC_FINGER_C2H2_2. 16 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3TFZ4-1 [UniParc]FASTAAdd to Basket

« Hide

MEAVTFGDVA VHFSREEWQC LDSGQRALYK EVMLENHSSV AGLAGFLVFK    50
PELISRLEQG QEPWVLDLQG AEGTEAPRIC QTDSAIRTDR KQTCEYTSLL 100
QRQIPGFGDN LDSKVWSENC PRSLGLSVSG SLFQKHRLNS EAVMPKNSTK 150
DAVQERKELQ ATDVGYRPDD QRDHLSSKLI RRQSVPTGEN RYPCEECGKA 200
FRWRSRLNQH KLSHTGEKSY QCNKCTKVFA SSSRLIRHQR AHTGEKPFKC 250
DQCGKRFVLA SVLTQHQRIH TGERPFKCAE CGKGFHLSAK LVQHQRIHTG 300
EKPYRCEECG KTFGQSSSLV HHQRIHTGER PFICQECGKA FCQRSQLSRH 350
RRTHTGERPY SCQECGKAFC QRATLAQHQK MMHTAEKSQM PRASESPSLI 400
ACQGNTTEEK PFKCEQCGKA FRWLSRLNQH QVVHSGEKPY QCNKCSKAFG 450
CTSRLIRHQR THTGEKPFKC DECGKRFVQS SHLIQHQRIH TGEKPYVCDD 500
CGRAFTQSSS LIYHQRIHKG EKPYKCSQCG KAFSMSTQLT SHQRTHTGER 550
PYTCNECGKT FRQNSTLFQH QIIHVRVKPY ECNECGKAFS RSSYLIEHQR 600
IHTRAQGGHE FGDTPESPTV LNHKKVHTVK KLYQCDDCDK VFRWRSYLII 650
HQRIHTGERP YKCNACGKAF HQIAKLTQHQ KLHMR 685
Length:685
Mass (Da):78,762
Last modified:October 11, 2005 - v1
Checksum:i6154FCAC21F308DD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC157554 Genomic DNA. No translation available.
AK144887 mRNA. Translation: BAE26117.1.
AK168948 mRNA. Translation: BAE40754.1.
CH466545 Genomic DNA. Translation: EDL29620.1.
RefSeqiNP_666021.2. NM_145916.2.
XP_006520858.1. XM_006520795.1.
UniGeneiMm.38948.

Genome annotation databases

EnsembliENSMUST00000023179; ENSMUSP00000023179; ENSMUSG00000033669.
GeneIDi223669.
KEGGimmu:223669.
UCSCiuc007wmo.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC157554 Genomic DNA. No translation available.
AK144887 mRNA. Translation: BAE26117.1 .
AK168948 mRNA. Translation: BAE40754.1 .
CH466545 Genomic DNA. Translation: EDL29620.1 .
RefSeqi NP_666021.2. NM_145916.2.
XP_006520858.1. XM_006520795.1.
UniGenei Mm.38948.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000023179 ; ENSMUSP00000023179 ; ENSMUSG00000033669 .
GeneIDi 223669.
KEGGi mmu:223669.
UCSCi uc007wmo.2. mouse.

Organism-specific databases

CTDi 223669.
MGIi MGI:99208. Zfp7.

Phylogenomic databases

GeneTreei ENSGT00750000117300.
HOGENOMi HOG000234617.
HOVERGENi HBG018163.
InParanoidi Q3TFZ4.
KOi K09228.
OMAi NALEGST.
OrthoDBi EOG7KSX7Q.
TreeFami TF341817.

Miscellaneous databases

NextBioi 376804.
PROi Q3TFZ4.
SOURCEi Search...

Gene expression databases

Genevestigatori Q3TFZ4.

Family and domain databases

Gene3Di 3.30.160.60. 16 hits.
InterProi IPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF01352. KRAB. 1 hit.
PF00096. zf-C2H2. 1 hit.
[Graphical view ]
SMARTi SM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 16 hits.
[Graphical view ]
SUPFAMi SSF109640. SSF109640. 1 hit.
PROSITEi PS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 16 hits.
PS50157. ZINC_FINGER_C2H2_2. 16 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HeartImported and LungImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HeartImported and LungImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HeartImported and LungImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HeartImported and LungImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HeartImported and LungImported.
  6. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
    Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
    , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
    Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  7. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: LungImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HeartImported.
  9. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HeartImported and LungImported.
  10. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: HeartImported and LungImported.
  11. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  12. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  13. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ3TFZ4_MOUSE
AccessioniPrimary (citable) accession number: Q3TFZ4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: April 16, 2014
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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