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Q3TFZ4

- Q3TFZ4_MOUSE

UniProt

Q3TFZ4 - Q3TFZ4_MOUSE

Protein
Submitted name:

Protein Zfp7

Gene

Zfp7

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 94 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. nucleic acid binding Source: InterPro
    3. sequence-specific DNA binding transcription factor activity Source: RefGenome

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: RefGenome

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Zfp7Imported
    Submitted name:
    Zinc finger protein 7, isoform CRA_aImported
    Gene namesi
    Name:Zfp7Imported
    ORF Names:mCG_142392Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 15

    Organism-specific databases

    MGIiMGI:99208. Zfp7.

    Subcellular locationi

    GO - Cellular componenti

    1. intracellular Source: InterPro

    Expressioni

    Gene expression databases

    GenevestigatoriQ3TFZ4.

    Family & Domainsi

    Keywords - Domaini

    RepeatSAAS annotation, Zinc-fingerSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00750000117300.
    HOGENOMiHOG000234617.
    HOVERGENiHBG018163.
    InParanoidiQ3TFZ4.
    KOiK09228.
    OMAiNALEGST.
    OrthoDBiEOG7KSX7Q.
    TreeFamiTF341817.

    Family and domain databases

    Gene3Di3.30.160.60. 16 hits.
    InterProiIPR001909. Krueppel-associated_box.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    PfamiPF01352. KRAB. 1 hit.
    PF00096. zf-C2H2. 1 hit.
    [Graphical view]
    SMARTiSM00349. KRAB. 1 hit.
    SM00355. ZnF_C2H2. 16 hits.
    [Graphical view]
    SUPFAMiSSF109640. SSF109640. 1 hit.
    PROSITEiPS50805. KRAB. 1 hit.
    PS00028. ZINC_FINGER_C2H2_1. 16 hits.
    PS50157. ZINC_FINGER_C2H2_2. 16 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3TFZ4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEAVTFGDVA VHFSREEWQC LDSGQRALYK EVMLENHSSV AGLAGFLVFK    50
    PELISRLEQG QEPWVLDLQG AEGTEAPRIC QTDSAIRTDR KQTCEYTSLL 100
    QRQIPGFGDN LDSKVWSENC PRSLGLSVSG SLFQKHRLNS EAVMPKNSTK 150
    DAVQERKELQ ATDVGYRPDD QRDHLSSKLI RRQSVPTGEN RYPCEECGKA 200
    FRWRSRLNQH KLSHTGEKSY QCNKCTKVFA SSSRLIRHQR AHTGEKPFKC 250
    DQCGKRFVLA SVLTQHQRIH TGERPFKCAE CGKGFHLSAK LVQHQRIHTG 300
    EKPYRCEECG KTFGQSSSLV HHQRIHTGER PFICQECGKA FCQRSQLSRH 350
    RRTHTGERPY SCQECGKAFC QRATLAQHQK MMHTAEKSQM PRASESPSLI 400
    ACQGNTTEEK PFKCEQCGKA FRWLSRLNQH QVVHSGEKPY QCNKCSKAFG 450
    CTSRLIRHQR THTGEKPFKC DECGKRFVQS SHLIQHQRIH TGEKPYVCDD 500
    CGRAFTQSSS LIYHQRIHKG EKPYKCSQCG KAFSMSTQLT SHQRTHTGER 550
    PYTCNECGKT FRQNSTLFQH QIIHVRVKPY ECNECGKAFS RSSYLIEHQR 600
    IHTRAQGGHE FGDTPESPTV LNHKKVHTVK KLYQCDDCDK VFRWRSYLII 650
    HQRIHTGERP YKCNACGKAF HQIAKLTQHQ KLHMR 685
    Length:685
    Mass (Da):78,762
    Last modified:October 11, 2005 - v1
    Checksum:i6154FCAC21F308DD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC157554 Genomic DNA. No translation available.
    AK144887 mRNA. Translation: BAE26117.1.
    AK168948 mRNA. Translation: BAE40754.1.
    CH466545 Genomic DNA. Translation: EDL29620.1.
    RefSeqiNP_666021.2. NM_145916.2.
    XP_006520858.1. XM_006520795.1.
    UniGeneiMm.38948.

    Genome annotation databases

    EnsembliENSMUST00000023179; ENSMUSP00000023179; ENSMUSG00000033669.
    GeneIDi223669.
    KEGGimmu:223669.
    UCSCiuc007wmo.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC157554 Genomic DNA. No translation available.
    AK144887 mRNA. Translation: BAE26117.1 .
    AK168948 mRNA. Translation: BAE40754.1 .
    CH466545 Genomic DNA. Translation: EDL29620.1 .
    RefSeqi NP_666021.2. NM_145916.2.
    XP_006520858.1. XM_006520795.1.
    UniGenei Mm.38948.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000023179 ; ENSMUSP00000023179 ; ENSMUSG00000033669 .
    GeneIDi 223669.
    KEGGi mmu:223669.
    UCSCi uc007wmo.2. mouse.

    Organism-specific databases

    CTDi 223669.
    MGIi MGI:99208. Zfp7.

    Phylogenomic databases

    GeneTreei ENSGT00750000117300.
    HOGENOMi HOG000234617.
    HOVERGENi HBG018163.
    InParanoidi Q3TFZ4.
    KOi K09228.
    OMAi NALEGST.
    OrthoDBi EOG7KSX7Q.
    TreeFami TF341817.

    Miscellaneous databases

    NextBioi 376804.
    PROi Q3TFZ4.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3TFZ4.

    Family and domain databases

    Gene3Di 3.30.160.60. 16 hits.
    InterProi IPR001909. Krueppel-associated_box.
    IPR007087. Znf_C2H2.
    IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    Pfami PF01352. KRAB. 1 hit.
    PF00096. zf-C2H2. 1 hit.
    [Graphical view ]
    SMARTi SM00349. KRAB. 1 hit.
    SM00355. ZnF_C2H2. 16 hits.
    [Graphical view ]
    SUPFAMi SSF109640. SSF109640. 1 hit.
    PROSITEi PS50805. KRAB. 1 hit.
    PS00028. ZINC_FINGER_C2H2_1. 16 hits.
    PS50157. ZINC_FINGER_C2H2_2. 16 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeartImported and LungImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeartImported and LungImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeartImported and LungImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeartImported and LungImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeartImported and LungImported.
    6. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
      Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
      , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
      Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    7. Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: LungImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeartImported.
    9. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeartImported and LungImported.
    10. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: HeartImported and LungImported.
    11. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    12. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    13. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ3TFZ4_MOUSE
    AccessioniPrimary (citable) accession number: Q3TFZ4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 94 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3