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Protein
Submitted name:

Putative uncharacterized protein

Gene

Msi2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Msi2Imported
Synonyms:Msi2hImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1923876. Msi2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000069769.
ExpressionAtlasiQ3TE41. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000090470.

Structurei

3D structure databases

SMRiQ3TE41.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 111RRM (RNA recognition motif)InterPro annotationAdd BLAST91
Domaini110 – 187RRM (RNA recognition motif)InterPro annotationAdd BLAST78

Phylogenomic databases

eggNOGiKOG4205. Eukaryota.
ENOG410YA8Z. LUCA.
HOVERGENiHBG002295.
KOiK14411.
OMAiIDMYSSG.
OrthoDBiEOG091G1CPI.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 2 hits.
[Graphical view]
SMARTiSM00360. RRM. 2 hits.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 2 hits.
PROSITEiPS50102. RRM. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3TE41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEANGSPGTS GSANDSQHDP GKMFIGGLSW QTSPDSLRDY FSKFGEIREC
60 70 80 90 100
MVMRDPTTKR SRGFGFVTFA DPASVDKVLG QPHHELDSKT IDPKVAFPRR
110 120 130 140 150
AQPKMVTRTK KIFVGGLSAN TVVEDVKQYF EQFGKVEDAM LMFDKTTNRH
160 170 180 190 200
RGFGFVTFEN EDVVEKVCEI HFHEINNKMV ECKKAQPKEV MFPPGTRGRA
210 220 230 240 250
RGLPYTMDAF MLGMGMLGYP NFVATYGRGY PGFAPSYGYQ FPGFPAAAYG
260 270 280 290 300
PVAAAAVAAA RGSVLNSYSA QPNFGAPASP AGSNPARPGG FPGANSPGPV
310 320 330 340
ADLYGPASQD SGVGNYISAA SPQPGSGFGH GIAGPLIATA FTNGYH
Length:346
Mass (Da):36,939
Last modified:February 5, 2008 - v1
Checksum:iC2C75F2D7077AF61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK153928 mRNA. Translation: BAE32260.1.
AK169846 mRNA. Translation: BAE41407.1.
RefSeqiNP_473384.1. NM_054043.3.
UniGeneiMm.400451.
Mm.428433.
Mm.474737.

Genome annotation databases

GeneIDi76626.
KEGGimmu:76626.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK153928 mRNA. Translation: BAE32260.1.
AK169846 mRNA. Translation: BAE41407.1.
RefSeqiNP_473384.1. NM_054043.3.
UniGeneiMm.400451.
Mm.428433.
Mm.474737.

3D structure databases

SMRiQ3TE41.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000090470.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi76626.
KEGGimmu:76626.

Organism-specific databases

CTDi124540.
MGIiMGI:1923876. Msi2.

Phylogenomic databases

eggNOGiKOG4205. Eukaryota.
ENOG410YA8Z. LUCA.
HOVERGENiHBG002295.
KOiK14411.
OMAiIDMYSSG.
OrthoDBiEOG091G1CPI.

Miscellaneous databases

ChiTaRSiMsi2. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000069769.
ExpressionAtlasiQ3TE41. baseline and differential.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 2 hits.
[Graphical view]
SMARTiSM00360. RRM. 2 hits.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 2 hits.
PROSITEiPS50102. RRM. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3TE41_MOUSE
AccessioniPrimary (citable) accession number: Q3TE41
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 30, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.