Q3TDT5 (Q3TDT5_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE41514.1

Gene names

Name:

Il6st MGI 96560

Organism

Mus musculus (Mouse) EMBL BAE41514.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	164 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	glycogen metabolic process Inferred from mutant phenotype PubMed 10205167. Source: MGI interleukin-11-mediated signaling pathway Inferred from direct assay PubMed 7957045. Source: GOC interleukin-27-mediated signaling pathway Inferred from electronic annotation. Source: Compara negative regulation of interleukin-6-mediated signaling pathway Inferred from electronic annotation. Source: Compara positive regulation of T cell proliferation Inferred from electronic annotation. Source: Compara positive regulation of astrocyte differentiation Inferred from mutant phenotype PubMed 10486560. Source: MGI positive regulation of cell proliferation Inferred from genetic interaction PubMed 15051883. Source: MGI positive regulation of osteoblast differentiation Inferred from electronic annotation. Source: Compara positive regulation of tyrosine phosphorylation of Stat1 protein Inferred from electronic annotation. Source: Compara positive regulation of tyrosine phosphorylation of Stat3 protein Inferred from electronic annotation. Source: Compara regulation of Notch signaling pathway Inferred from direct assay PubMed 12629177. Source: MGI
Cellular_component	ciliary neurotrophic factor receptor complex Inferred from electronic annotation. Source: Compara dendrite Inferred from direct assay PubMed 10989258. Source: MGI external side of plasma membrane Inferred from direct assay PubMed 11275690. Source: MGI extracellular space Inferred from electronic annotation. Source: Compara interleukin-6 receptor complex Inferred from electronic annotation. Source: Compara neuronal cell body Inferred from direct assay PubMed 10989258. Source: MGI oncostatin-M receptor complex Inferred from electronic annotation. Source: Compara
Molecular_function	interleukin-6 receptor activity Inferred from electronic annotation. Source: Compara leukemia inhibitory factor receptor activity Inferred from electronic annotation. Source: Compara oncostatin-M receptor activity Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3TDT5 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: CD2D736EB32CC0AA	FASTA	164	18,538
	10 20 30 40 50 60 MSAPRIWLAQ ALLFFLTTES IGQLLEPCGY IYPEFPVVQR GSNFTAICVL KEACLQHYYV 70 80 90 100 110 120 NASYIVWKTN HAAVPREQVT VINRTTSSVT FTDVVLPSVQ LTCNILSFGQ IEQNVYGVTM 130 140 150 160 LSGFPPDKPT NLTCIVNEGK NMLCQWDPGR ETYLETNYTL KSEW

References

[1]	"High-efficiency full-length cDNA cloning." Carninci P., Hayashizaki Y. Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE41514.1.
[2]	"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes." Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y. Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE41514.1.
[3]	"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer." Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y. Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE41514.1.
[4]	"Functional annotation of a full-length mouse cDNA collection." The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature 409:685-690(2001) Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE41514.1.
[5]	"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team Nature 420:563-573(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE41514.1.
[6]	Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y. Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE41514.1.
[7]	"The Transcriptional Landscape of the Mammalian Genome." The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science 309:1559-1563(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE41514.1.
[8]	"Antisense Transcription in the Mammalian Transcriptome." RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NOD EMBL BAE41514.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK170020 mRNA. Translation: BAE41514.1.
IPI	IPI00120155.
UniGene	Mm.4364.
3D structure databases
ProteinModelPortal	Q3TDT5.
SMR	Q3TDT5. Positions 24-164.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
UCSC	uc007rwf.2. mouse.
Organism-specific databases
MGI	MGI:96560. Il6st.
Phylogenomic databases
InParanoid	Q3TDT5.
Gene expression databases
ArrayExpress	Q3TDT5.
Bgee	Q3TDT5.
Genevestigator	Q3TDT5.
Family and domain databases
Gene3D	2.60.40.10. 2 hits.
InterPro	IPR003961. Fibronectin_type3. IPR013783. Ig-like_fold. IPR010457. IgC2-like_lig-bd. IPR015321. IL6_recept-bd. [Graphical view]
Pfam	PF09240. IL6Ra-bind. 1 hit. PF06328. Lep_receptor_Ig. 1 hit. [Graphical view]
SUPFAM	SSF49265. FN_III-like. 2 hits.
ProtoNet	Search...
Other
SOURCE	Search...

Entry information

Entry name

Q3TDT5_MOUSE

Accession

Primary (citable) accession number: Q3TDT5

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	May 29, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)