Unreviewed,
UniProtKB/TrEMBL Q3TDA4 (Q3TDA4_MOUSE)
Last modified
March 2, 2010.
Version 45.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Putative uncharacterized protein EMBL BAE41700.1 Submitted name: Ccr5 protein EMBL AAI05644.1 | ||
| Gene names |
| ||
| Organism | Mus musculus (Mouse) EMBL BAE41700.1 | ||
| Taxonomic identifier | 10090 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus |
Protein attributes
| Sequence length | 354 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Sequence similarities | Belongs to the G-protein coupled receptor 1 family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cell membrane Spearmint SPM000355 Membrane |
| Domain | Transmembrane RuleBase RU000688V2 Spearmint SPM000355 |
| Molecular function | G-protein coupled receptor RuleBase RU000688V2 Spearmint SPM000355 Receptor Transducer |
| Gene Ontology (GO) | |
| Biological process | G-protein coupled receptor protein signaling pathway Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | external side of plasma membrane Inferred from direct assay. Source: MGI integral to membraneInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | C-C chemokine receptor activity Inferred from direct assay. Source: MGI |
| Complete GO annotation... | |
Sequences
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References
| [1] | "The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. Hayashizaki Y.Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: NOD EMBL BAE41700.1. |
| [2] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: PCR rescued clones EMBL AAI05644.1. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BC105643 mRNA. Translation: AAI05644.1. AK170303 mRNA. Translation: BAE41700.1. |
| IPI | IPI00653496. |
| UniGene | Mm.14302 |
3D structure databases | |
| SMR | Q3TDA4. Positions 31-311. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q3TDA4. |
Protein family/group databases | |
| GPCRDB | Search... |
Genome annotation databases | |
| Ensembl | ENSMUST00000111442; ENSMUSP00000107069; ENSMUSG00000079227; Mus musculus. [Genome view] |
Organism-specific databases | |
| MGI | MGI:107182. Ccr5. |
Phylogenomic databases | |
| HOVERGEN | HBG106917. |
| InParanoid | Q3TDA4. |
Gene expression databases | |
| ArrayExpress | Q3TDA4. |
| Bgee | Q3TDA4. |
| Genevestigator | Q3TDA4. |
Family and domain databases | |
| InterPro | IPR000276. 7TM_GPCR_Rhodpsn. IPR002240. CC_5_rcpt. IPR000355. Chmkine_rcpt. IPR017452. GPCR_Rhodpsn_supfam. [Graphical view] |
| PANTHER | PTHR19264:SF204. CC_5_rcpt. 1 hit. |
| Pfam | PF00001. 7tm_1. 1 hit. [Graphical view] |
| PRINTS | PR00657. CCCHEMOKINER. PR01110. CHEMOKINER5. PR00237. GPCRRHODOPSN. |
| PROSITE | PS00237. G_PROTEIN_RECEP_F1_1. 1 hit. PS50262. G_PROTEIN_RECEP_F1_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| SOURCE | Search... |
Entry information
| Entry name | Q3TDA4_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q3TDA4 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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