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Protein

Secretory carrier-associated membrane protein

Gene

Scamp1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Secretory carrier-associated membrane proteinUniRule annotation
Short name:
Secretory carrier membrane proteinUniRule annotation
Gene namesi
Name:Scamp1Imported
ORF Names:mCG_114101Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1349480 Scamp1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei153 – 174HelicalUniRule annotationAdd BLAST22
Transmembranei186 – 206HelicalUniRule annotationAdd BLAST21
Transmembranei218 – 238HelicalUniRule annotationAdd BLAST21
Transmembranei258 – 282HelicalUniRule annotationAdd BLAST25

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiQ3TD71

Expressioni

Gene expression databases

BgeeiENSMUSG00000021687
ExpressionAtlasiQ3TD71 baseline and differential

Structurei

3D structure databases

SMRiQ3TD71
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili82 – 114Sequence analysisAdd BLAST33

Sequence similaritiesi

Belongs to the SCAMP family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiKOG3088 Eukaryota
ENOG410XSJN LUCA
HOVERGENiHBG071938
KOiK19995
OMAiLAIFYTM
OrthoDBiEOG091G0ID2

Family and domain databases

InterProiView protein in InterPro
IPR007273 SCAMP
PANTHERiPTHR10687 PTHR10687, 1 hit
PfamiView protein in Pfam
PF04144 SCAMP, 1 hit

Sequencei

Sequence statusi: Complete.

Q3TD71-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDFDSNPFA DPDLNNPFKD PSVTQVTRNV PPGLDEYNPF SDSRTPPPGS
60 70 80 90 100
VKMPNVPNTQ PAIMKPTEEH PAYTQITKEH ALAQAELLKR QEELERKAAE
110 120 130 140 150
LDRREREMQN LSQHGRKNNW PPLPSNFPVG PCFYQDFSVD IPVEFQKTVK
160 170 180 190 200
LMYYLWMFHA VTLFLNIFGC LAWFCVDSSR AVDFGLSILW FLLFTPCSFV
210 220 230 240 250
CWYRPLYGAF RSDSSFRFFV FFFVYICQFA VHVLQAAGFH NWGNCGWISS
260 270 280 290 300
LTGLNKNIPV GIMMIIIAAL FTASAVISLV MFKKVHGLYR TTGASFEKAQ
310 320 330
QEFATGVMSN KTVQTAAANA ASTAATSAAQ NAFKGNQM
Length:338
Mass (Da):38,029
Last modified:October 11, 2005 - v1
Checksum:i7588A06064B23B9D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK170343 mRNA Translation: BAE41733.1
CH466567 Genomic DNA Translation: EDL00923.1
RefSeqiNP_083429.1, NM_029153.1
UniGeneiMm.201455

Genome annotation databases

GeneIDi107767
KEGGimmu:107767

Similar proteinsi

Entry informationi

Entry nameiQ3TD71_MOUSE
AccessioniPrimary (citable) accession number: Q3TD71
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 23, 2018
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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