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Protein
Submitted name:

L-selectin

Gene

Sell

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
L-selectinImported
Gene namesi
Name:SellImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 1

Organism-specific databases

MGIiMGI:98279. Sell.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei298 – 319HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 38Sequence analysisAdd BLAST38
ChainiPRO_500878020339 – 336Sequence analysisAdd BLAST298

Keywords - PTMi

Disulfide bondSAAS annotation

Expressioni

Gene expression databases

BgeeiENSMUSG00000026581.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 156C-type lectinInterPro annotationAdd BLAST123
Domaini159 – 220Sushi (CCP/SCR)InterPro annotationAdd BLAST62
Domaini221 – 282Sushi (CCP/SCR)InterPro annotationAdd BLAST62

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000118803.
HOGENOMiHOG000236254.
HOVERGENiHBG052375.

Family and domain databases

CDDicd00033. CCP. 2 hits.
Gene3Di3.10.100.10. 1 hit.
InterProiIPR001304. C-type_lectin-like.
IPR016186. C-type_lectin-like/link.
IPR018378. C-type_lectin_CS.
IPR016187. CTDL_fold.
IPR016348. L-selectin.
IPR002396. Selectin_superfamily.
IPR000436. Sushi_SCR_CCP_dom.
[Graphical view]
PANTHERiPTHR19325:SF352. PTHR19325:SF352. 1 hit.
PfamiPF00059. Lectin_C. 1 hit.
PF00084. Sushi. 2 hits.
[Graphical view]
PRINTSiPR00343. SELECTIN.
SMARTiSM00032. CCP. 2 hits.
SM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 1 hit.
SSF57535. SSF57535. 2 hits.
PROSITEiPS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
PS50923. SUSHI. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3TCF3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVFPWRCEGT YWGSRNILKL WVWTLLCCDF LIHHGTHCWT YHYSEKPMNW
60 70 80 90 100
ENARKFCKQN YTDLVAIQNK REIEYLENTL PKSPYYYWIG IRKIGKMWTW
110 120 130 140 150
VGTNKTLTKE AENWGAGEPN NKKSKEDCVE IYIKRERDSG KWNDDACHKR
160 170 180 190 200
KAALCYTVVQ CEPLEAPELG TMDCIHPLGN FSFQSKCAFN CSEGRELLGT
210 220 230 240 250
AETQCGASGN WSSPEPICQV VQCEPLEAPE LGTMDCIHPL GNFSFQSKCA
260 270 280 290 300
FNCSEGRELL GTAETQCGAS GNWSSPEPIC QETNRSFSKI KEGDYNPLFI
310 320 330
PVAVMVTAFS GLAFLIWLAR RLKKGKKSQE RMDDPY
Length:336
Mass (Da):38,463
Last modified:October 11, 2005 - v1
Checksum:i60FFD09756963C66
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC110499 Genomic DNA. No translation available.
AK170753 mRNA. Translation: BAE42004.1.
RefSeqiNP_001157531.1. NM_001164059.1.
UniGeneiMm.1461.

Genome annotation databases

EnsembliENSMUST00000192047; ENSMUSP00000142237; ENSMUSG00000026581.
GeneIDi20343.
UCSCiuc011wuv.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC110499 Genomic DNA. No translation available.
AK170753 mRNA. Translation: BAE42004.1.
RefSeqiNP_001157531.1. NM_001164059.1.
UniGeneiMm.1461.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000192047; ENSMUSP00000142237; ENSMUSG00000026581.
GeneIDi20343.
UCSCiuc011wuv.1. mouse.

Organism-specific databases

CTDi6402.
MGIiMGI:98279. Sell.

Phylogenomic databases

GeneTreeiENSGT00760000118803.
HOGENOMiHOG000236254.
HOVERGENiHBG052375.

Miscellaneous databases

ChiTaRSiSell. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000026581.

Family and domain databases

CDDicd00033. CCP. 2 hits.
Gene3Di3.10.100.10. 1 hit.
InterProiIPR001304. C-type_lectin-like.
IPR016186. C-type_lectin-like/link.
IPR018378. C-type_lectin_CS.
IPR016187. CTDL_fold.
IPR016348. L-selectin.
IPR002396. Selectin_superfamily.
IPR000436. Sushi_SCR_CCP_dom.
[Graphical view]
PANTHERiPTHR19325:SF352. PTHR19325:SF352. 1 hit.
PfamiPF00059. Lectin_C. 1 hit.
PF00084. Sushi. 2 hits.
[Graphical view]
PRINTSiPR00343. SELECTIN.
SMARTiSM00032. CCP. 2 hits.
SM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 1 hit.
SSF57535. SSF57535. 2 hits.
PROSITEiPS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
PS50923. SUSHI. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3TCF3_MOUSE
AccessioniPrimary (citable) accession number: Q3TCF3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 30, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.