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Protein
Submitted name:

Zfhx1b zinc finger homeobox 1b

Gene

Zeb2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zfhx1b zinc finger homeobox 1bImported
Gene namesi
Name:Zeb2Imported
Synonyms:Zfhx1bImported, ZfhxibImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1307272. Zeb2.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusImported

PTM / Processingi

Proteomic databases

PaxDbiQ3T921.
PRIDEiQ3T921.

PTM databases

iPTMnetiQ3T921.
PhosphoSitePlusiQ3T921.

Expressioni

Gene expression databases

GenevisibleiQ3T921. RN.

Structurei

3D structure databases

ProteinModelPortaliQ3T921.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini211 – 239C2H2-typeInterPro annotationAdd BLAST29
Domaini241 – 263C2H2-typeInterPro annotationAdd BLAST23
Domaini282 – 309C2H2-typeInterPro annotationAdd BLAST28
Domaini999 – 1026C2H2-typeInterPro annotationAdd BLAST28
Domaini1027 – 1054C2H2-typeInterPro annotationAdd BLAST28
Domaini1055 – 1083C2H2-typeInterPro annotationAdd BLAST29

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410KCPI. Eukaryota.
ENOG410ZQ40. LUCA.
HOGENOMiHOG000264256.
HOVERGENiHBG004697.
KOiK09299.
PhylomeDBiQ3T921.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
Gene3Di3.30.40.10. 2 hits.
InterProiView protein in InterPro
IPR008598. Di19_Zn_binding_dom.
IPR009057. Homeobox-like.
IPR001356. Homeobox_dom.
IPR013087. Znf_C2H2_type.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF05605. zf-Di19. 1 hit.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SM00355. ZnF_C2H2. 8 hits.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF57667. SSF57667. 4 hits.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 5 hits.
PS50157. ZINC_FINGER_C2H2_2. 6 hits.

Sequencei

Sequence statusi: Complete.

Q3T921-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQPIMADGP RCKRRKQANP RRKNVVNYDN VVDAGSETDE EDKLHIAEDD
60 70 80 90 100
GIANPLDQET SPASMPNHES SPHMSQGLLP REEEEDEIRE SVVEHSWHSG
110 120 130 140 150
EILQASVDGP EEMKEDYDAL GPEATIQTTI NNGTVKNANC TSDFEEYFAK
160 170 180 190 200
RKLEERDGHA VSIEEYLQRS DTAIIYPEAP EELSRLGTPE ANGQEENDLP
210 220 230 240 250
PGTPDAFAQL LTCPYCDRGY KRLTSLKEHI KYRHEKNEEN FSCPLCSYTF
260 270 280 290 300
AYRTQLERHM VTHKPGTDQH QMLTQGAGNR KFKCTECGKA FKYKHHLKEH
310 320 330 340 350
LRIHSGEKPY ECPNCKKRFS HSGSYSSHIS SKKCIGLISV NGRMRNNIKT
360 370 380 390 400
GSSPNSVSSS PTNSAITQLR NKLENGKPLS MSEQTGLLKI KTEPLDFNDY
410 420 430 440 450
KVLMATHGFS GTSPFMNGGL GATSPLGVHP SAQSPMQHLG VGLEAPLLGF
460 470 480 490 500
PTMNSNLSEV QKVLQIVDNT VSRQKMDCKT EDISKLKGYH MKDPCSQPEE
510 520 530 540 550
QGVTSPSIPA VGLPVVSHNG ATKSIIDYTL EKVNEAKACL QSLTTDSRRQ
560 570 580 590 600
ISNIKKEKLR TLIDLVTDDK MIENHSIPTP FSCQFCKESF PGPIPLHQHE
610 620 630 640 650
RYLCKMNEEI KAVLQPHENI VPNKAGVFVD NKALLLSSVL SEKGLTSPIN
660 670 680 690 700
PYKDHMSVLK AYYAMNMEPN SDELLKISIA VGLPQEFVKE WFEQRKVYQY
710 720 730 740 750
SSSRSPSLER NSKPLAPNSN PTTKDSLLPR SPVKPMDSIT SPSIAELHNS
760 770 780 790 800
VTSCDPPLRL TKSSHFTNTK AVDKLDHSRS NTPSPLNLSS TSSKNSHSSS
810 820 830 840 850
YTPNSFSSEE LQAEPLDLSL PKQMREPKSI IATKNKTKAT SISLDHNSVS
860 870 880 890 900
SSSENSDEPL NLTFIKKEFS NSNNLDNKST NPVFGMNPFS AKPLYTALPP
910 920 930 940 950
QSAFPPATFM PPVQTSIPGL RPYPGLDQMS FLPHMAYTYP TGAATFADMQ
960 970 980 990 1000
QRRKYQRKQG FQGELLDGAQ DYMSGLDDLT DSDSCLSRKK IKKTESGMYA
1010 1020 1030 1040 1050
CDLCDKTFQK SSSLLRHKYE HTGKRPHQCQ ICKKAFKHKH HLIEHSRLHS
1060 1070 1080 1090 1100
GEKPYQCDKC GKRFSHSGSY SQHMNHRYSY CKREAEEREA AEREAREKGH
1110 1120 1130 1140 1150
LEPTELLMNR AYLQSITPQG YSDSEERESM PRDGESEKEH EKEGEEGYGK
1160 1170 1180 1190 1200
LRRRDGDEEE EEEEEESENK SMDTDPETIR DEEETGDHSM DDSSEDGKME
1210
TKSDHEEDNM EDGME
Length:1,215
Mass (Da):136,498
Last modified:October 11, 2005 - v1
Checksum:iC18AFA412EF4C506
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM084708 mRNA. Translation: CAJ29798.1.
RefSeqiNP_001028873.1. NM_001033701.1.
UniGeneiRn.59710.

Genome annotation databases

GeneIDi311071.
KEGGirno:311071.
UCSCiRGD:1307272. rat.

Similar proteinsi

Entry informationi

Entry nameiQ3T921_RAT
AccessioniPrimary (citable) accession number: Q3T921
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 27, 2017
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)