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Protein

Polypeptide N-acetylgalactosaminyltransferase

Gene

Galnt3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Cofactori

Mn2+UniRule annotationSAAS annotation

Pathwayi: protein glycosylation

This protein is involved in the pathway protein glycosylation, which is part of Protein modification.UniRule annotationSAAS annotation
View all proteins of this organism that are known to be involved in the pathway protein glycosylation and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseUniRule annotationSAAS annotation, Transferase

Keywords - Ligandi

LectinUniRule annotationSAAS annotation, ManganeseUniRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-RNO-190372. FGFR3c ligand binding and activation.
R-RNO-913709. O-linked glycosylation of mucins.
UniPathwayiUPA00378.

Names & Taxonomyi

Protein namesi
Recommended name:
Polypeptide N-acetylgalactosaminyltransferaseUniRule annotation (EC:2.4.1.-UniRule annotation)
Alternative name(s):
Protein-UDP acetylgalactosaminyltransferaseUniRule annotation
Gene namesi
Name:Galnt3Imported
ORF Names:rCG_27411Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1306443. Galnt3.

Subcellular locationi

  • Golgi apparatus membrane UniRule annotation; Single-pass type II membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 37HelicalUniRule annotationAdd BLAST18

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatusUniRule annotationSAAS annotation, Membrane

PTM / Processingi

Keywords - PTMi

Disulfide bondUniRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSRNOG00000005727.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007615.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini516 – 630Ricin B-type lectinInterPro annotationAdd BLAST115

Sequence similaritiesi

Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.UniRule annotationSAAS annotation
Contains 1 ricin B-type lectin domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3736. Eukaryota.
ENOG410XPMK. LUCA.
GeneTreeiENSGT00760000118828.
HOGENOMiHOG000038227.
HOVERGENiHBG051699.
KOiK00710.
OMAiQYFEYSA.
OrthoDBiEOG091G085O.
TreeFamiTF313267.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF53448. SSF53448. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3T1J4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHLKRLVKL HIKRHYHRKF WKLGAVIFFF LVVLILMQRE VSVQYSKEES
60 70 80 90 100
KMERNLKNKN KMFDFMLEAV NNIKDAMPKM QIGAPIKQNI DVPERPCLQG
110 120 130 140 150
YYTAAELKPV LDRPPQDSNA PGASGKPFKI THLSPEEQKE KERGETKHCF
160 170 180 190 200
NAFASDRISL HRDLGPDTRP PECIEQKFKR CPPLPTTSVI IVFHNEAWST
210 220 230 240 250
LLRTVHSVLY SSPAILLKEI ILVDDASVDD YLHEKLEEYI KQFSIVKIVR
260 270 280 290 300
QQERKGLITA RLLGAAVATA ETLTFLDAHC ECFYGWLEPL LARIAENYTA
310 320 330 340 350
VVSPDIASID LNTFEFNKPS PYGSNHNRGN FDWSLSFGWE SLPDHEKQRR
360 370 380 390 400
KDETYPIKTP TFAGGLFSIS RDYFEHIGSY DEEMEIWGGE NIEMSFRVWQ
410 420 430 440 450
CGGQLEIMPC SVVGHVFRSK SPHTFPKGTQ VIARNQVRLA EVWMDEYKEI
460 470 480 490 500
FYRRNTDAAK IVKQKSFGDL SKRFEIKKRL QCKNFTWYLN TIYPEVYVPD
510 520 530 540 550
LNPVISGYIK SVGQPLCLDV GENNQGDKPL ILYTCHGLGG NQYFEYSAQR
560 570 580 590 600
EIRHNIQKEL CLHATQGVVQ LKACVYKGHR TIAPGEQIWE IRKDQLLYNP
610 620 630
LFRMCLSSNG EHPSLVPCDT TDLLQKWIFS QND
Length:633
Mass (Da):73,004
Last modified:October 11, 2005 - v1
Checksum:iB32273A329BFB39D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07052415 Genomic DNA. No translation available.
BC101886 mRNA. Translation: AAI01887.1.
CH473949 Genomic DNA. Translation: EDL79029.1.
RefSeqiNP_001015032.2. NM_001015032.3.
XP_006234352.1. XM_006234290.3.
UniGeneiRn.78014.

Genome annotation databases

EnsembliENSRNOT00000007615; ENSRNOP00000007615; ENSRNOG00000005727.
GeneIDi366061.
KEGGirno:366061.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07052415 Genomic DNA. No translation available.
BC101886 mRNA. Translation: AAI01887.1.
CH473949 Genomic DNA. Translation: EDL79029.1.
RefSeqiNP_001015032.2. NM_001015032.3.
XP_006234352.1. XM_006234290.3.
UniGeneiRn.78014.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007615.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000007615; ENSRNOP00000007615; ENSRNOG00000005727.
GeneIDi366061.
KEGGirno:366061.

Organism-specific databases

CTDi2591.
RGDi1306443. Galnt3.

Phylogenomic databases

eggNOGiKOG3736. Eukaryota.
ENOG410XPMK. LUCA.
GeneTreeiENSGT00760000118828.
HOGENOMiHOG000038227.
HOVERGENiHBG051699.
KOiK00710.
OMAiQYFEYSA.
OrthoDBiEOG091G085O.
TreeFamiTF313267.

Enzyme and pathway databases

UniPathwayiUPA00378.
ReactomeiR-RNO-190372. FGFR3c ligand binding and activation.
R-RNO-913709. O-linked glycosylation of mucins.

Gene expression databases

BgeeiENSRNOG00000005727.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF53448. SSF53448. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3T1J4_RAT
AccessioniPrimary (citable) accession number: Q3T1J4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 30, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.