Reviewed,
UniProtKB/Swiss-Prot Q3T0V9 (DEOC_BOVIN)
Last modified
February 9, 2010.
Version 32.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Putative deoxyribose-phosphate aldolase EC=4.1.2.4 Alternative name(s): Phosphodeoxyriboaldolase Short name=Deoxyriboaldolase Short name=DERA | ||
| Gene names |
| ||
| Organism | Bos taurus (Bovine) | ||
| Taxonomic identifier | 9913 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos |
Protein attributes
| Sequence length | 318 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. |
| Pathway | |
| Sequence similarities | Belongs to the deoC/fbaB aldolase family. DeoC type 2 subfamily. |
Ontologies
| Keywords | |
|---|---|
| Ligand | Schiff base |
| Molecular function | Lyase |
| PTM | Phosphoprotein |
| Gene Ontology (GO) | |
| Biological process | deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: InterPro |
| Molecular function | deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 318 | 318 | Putative deoxyribose-phosphate aldolase | PRO_0000283798 | |||||
Sites | |||||||||
| Active site | 218 | 1 | Schiff-base intermediate with acetaldehyde By similarity | ||||||
| Active site | 254 | 1 | By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 261 | 1 | Phosphoserine By similarity | ||||||
Sequences
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References
| [1] | NIH - Mammalian Gene Collection (MGC) project Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: Crossbred X Angus. Tissue: Ileum. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BC102242 mRNA. Translation: AAI02243.1. |
| IPI | IPI00716663. |
| RefSeq | NP_001069496.1. |
| UniGene | Bt.48820 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1O0Y based on UniProtKB Q9X1P5. |
| SMR | Q3T0V9. Positions 48-303. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q3T0V9. |
Genome annotation databases | |
| Ensembl | ENSBTAT00000007367; ENSBTAP00000007367; ENSBTAG00000022167; Bos taurus. [Genome view] |
| GeneID | 534558. |
| KEGG | bta:534558. |
Organism-specific databases | |
| CTD | 534558. |
Phylogenomic databases | |
| eggNOG | maNOG14180. |
| HOVERGEN | Q3T0V9. |
| InParanoid | Q3T0V9. |
| OMA | IDIVITR. |
| OrthoDB | EOG9V7226. |
| PhylomeDB | Q3T0V9. |
Enzyme and pathway databases | |
| BRENDA | 4.1.2.4. 251. |
Family and domain databases | |
| InterPro | IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/AroFGH_arch. [Graphical view] |
| Gene3D | G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. |
| PANTHER | PTHR10889. DeoC. 1 hit. |
| Pfam | PF01791. DeoC. 1 hit. [Graphical view] |
| PIRSF | PIRSF001357. DeoC. 1 hit. |
| TIGRFAMs | TIGR00126. deoC. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | DEOC_BOVIN | ||||||||
| Accession | Primary (citable) accession number: Q3T0V9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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