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Protein

39S ribosomal protein L17, mitochondrial

Gene

MRPL17

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L17, mitochondrial
Short name:
L17mt
Short name:
MRP-L17
Gene namesi
Name:MRPL17
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 15

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 88Mitochondrion1 Publication
Chaini9 – 17216439S ribosomal protein L17, mitochondrialPRO_0000237330Add
BLAST

Proteomic databases

PaxDbiQ3T0L3.
PRIDEiQ3T0L3.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000034395.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2FTCelectron microscopy-J11-127[»]
3IY9electron microscopy14.10S19-127[»]
ProteinModelPortaliQ3T0L3.
SMRiQ3T0L3. Positions 28-130.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ3T0L3.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L17P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3280. Eukaryota.
COG0203. LUCA.
GeneTreeiENSGT00390000010698.
HOGENOMiHOG000019780.
HOVERGENiHBG056029.
InParanoidiQ3T0L3.
KOiK02879.
OMAiAPRYKDQ.
OrthoDBiEOG74TX11.
TreeFamiTF105844.

Family and domain databases

Gene3Di3.90.1030.10. 1 hit.
InterProiIPR000456. Ribosomal_L17.
[Graphical view]
PANTHERiPTHR14413. PTHR14413. 1 hit.
PfamiPF01196. Ribosomal_L17. 1 hit.
[Graphical view]
SUPFAMiSSF64263. SSF64263. 1 hit.
TIGRFAMsiTIGR00059. L17. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q3T0L3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLSFAAAIS HGRVYRRLGL GPESRIHLLQ NLLTGLVRHE RIEASWARVD
60 70 80 90 100
ELRGYAEKLI DYGKLGDTNE RAMRMADFWL TEKDLIPKLF QVLAPRYQGQ
110 120 130 140 150
NGGYTRMLQI PNRNQQDRAK MAVIEYKGNC LPPLPLPRRD SNLTLLNQLL
160 170
RGLRQDQEAS TRSSHPAQTP EV
Length:172
Mass (Da):19,746
Last modified:October 11, 2005 - v1
Checksum:i3BF66CD4421BB948
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC102348 mRNA. Translation: AAI02349.1.
RefSeqiNP_001029446.1. NM_001034274.2.
UniGeneiBt.49032.

Genome annotation databases

EnsembliENSBTAT00000034505; ENSBTAP00000034395; ENSBTAG00000024781.
GeneIDi506988.
KEGGibta:506988.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC102348 mRNA. Translation: AAI02349.1.
RefSeqiNP_001029446.1. NM_001034274.2.
UniGeneiBt.49032.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2FTCelectron microscopy-J11-127[»]
3IY9electron microscopy14.10S19-127[»]
ProteinModelPortaliQ3T0L3.
SMRiQ3T0L3. Positions 28-130.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000034395.

Proteomic databases

PaxDbiQ3T0L3.
PRIDEiQ3T0L3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000034505; ENSBTAP00000034395; ENSBTAG00000024781.
GeneIDi506988.
KEGGibta:506988.

Organism-specific databases

CTDi63875.

Phylogenomic databases

eggNOGiKOG3280. Eukaryota.
COG0203. LUCA.
GeneTreeiENSGT00390000010698.
HOGENOMiHOG000019780.
HOVERGENiHBG056029.
InParanoidiQ3T0L3.
KOiK02879.
OMAiAPRYKDQ.
OrthoDBiEOG74TX11.
TreeFamiTF105844.

Enzyme and pathway databases

ReactomeiR-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Miscellaneous databases

EvolutionaryTraceiQ3T0L3.
NextBioi20867842.

Family and domain databases

Gene3Di3.90.1030.10. 1 hit.
InterProiIPR000456. Ribosomal_L17.
[Graphical view]
PANTHERiPTHR14413. PTHR14413. 1 hit.
PfamiPF01196. Ribosomal_L17. 1 hit.
[Graphical view]
SUPFAMiSSF64263. SSF64263. 1 hit.
TIGRFAMsiTIGR00059. L17. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Mammalian Gene Collection (MGC) project
    Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Crossbred X Angus.
    Tissue: Ileum.
  2. "Mammalian mitochondrial ribosomal proteins (2). Amino acid sequencing, characterization, and identification of corresponding gene sequences."
    O'Brien T.W., Fiesler S.E., Denslow N.D., Thiede B., Wittmann-Liebold B., Mougey E.B., Sylvester J.E., Graack H.R.
    J. Biol. Chem. 274:36043-36051(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 9-28, SUBCELLULAR LOCATION.
  3. "A structural model for the large subunit of the mammalian mitochondrial ribosome."
    Mears J.A., Sharma M.R., Gutell R.R., McCook A.S., Richardson P.E., Caulfield T.R., Agrawal R.K., Harvey S.C.
    J. Mol. Biol. 358:193-212(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (12 ANGSTROMS), SUBCELLULAR LOCATION.

Entry informationi

Entry nameiRM17_BOVIN
AccessioniPrimary (citable) accession number: Q3T0L3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: October 11, 2005
Last modified: December 9, 2015
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.