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Protein

39S ribosomal protein L16, mitochondrial

Gene

MRPL16

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Component of the large subunit of mitochondrial ribosome.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-BTA-5368286. Mitochondrial translation initiation.
R-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L16, mitochondrial
Short name:
L16mt
Short name:
MRP-L16
Gene namesi
Name:MRPL16
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 15

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 3636MitochondrionSequence analysisAdd
BLAST
Chaini37 – 25121539S ribosomal protein L16, mitochondrialPRO_0000239840Add
BLAST

Proteomic databases

PaxDbiQ3T0J3.
PRIDEiQ3T0J3.

Expressioni

Gene expression databases

BgeeiENSBTAG00000021188.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000028236.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2FTCelectron microscopy-I71-188[»]
ProteinModelPortaliQ3T0J3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ3T0J3.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L16P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3422. Eukaryota.
COG0197. LUCA.
GeneTreeiENSGT00390000002038.
HOGENOMiHOG000021349.
HOVERGENiHBG056553.
InParanoidiQ3T0J3.
KOiK02878.
OMAiIRPPKMQ.
OrthoDBiEOG091G0KF0.
TreeFamiTF312969.

Family and domain databases

CDDicd01433. Ribosomal_L16_L10e. 1 hit.
Gene3Di3.90.1170.10. 1 hit.
InterProiIPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
[Graphical view]
PANTHERiPTHR12220. PTHR12220. 1 hit.
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
PRINTSiPR00060. RIBOSOMALL16.
SUPFAMiSSF54686. SSF54686. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q3T0J3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWRLLSGARA PVLRATLSDS WAAPPARAGL KTLLPVPTFE DVSIPEKPKL
60 70 80 90 100
RFVERAPLVP KVRREPKNLR DIRGPSTEAT EFTEGNFAIL ALGGGYLHWG
110 120 130 140 150
HFEMMRLTIN RFMDPKNMFA LWRVPAPFKA ITRKGMGQRM GGGKGAIDHY
160 170 180 190 200
VTPVKAGRLI VEVGGRCEFQ EVQGILNQVA HKLPFPAKAV SRETLEKIQK
210 220 230 240 250
DQEERERNNQ NPWTFERIAT ANMLGIRKVL SPYDLTHRGR YWGKFYMPER

V
Length:251
Mass (Da):28,573
Last modified:October 11, 2005 - v1
Checksum:i9C03E0163DF55229
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC102369 mRNA. Translation: AAI02370.1.
RefSeqiNP_001029813.1. NM_001034641.2.
XP_015330464.1. XM_015474978.1.
UniGeneiBt.4402.

Genome annotation databases

EnsembliENSBTAT00000028236; ENSBTAP00000028236; ENSBTAG00000021188.
GeneIDi538054.
KEGGibta:538054.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC102369 mRNA. Translation: AAI02370.1.
RefSeqiNP_001029813.1. NM_001034641.2.
XP_015330464.1. XM_015474978.1.
UniGeneiBt.4402.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2FTCelectron microscopy-I71-188[»]
ProteinModelPortaliQ3T0J3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000028236.

Proteomic databases

PaxDbiQ3T0J3.
PRIDEiQ3T0J3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000028236; ENSBTAP00000028236; ENSBTAG00000021188.
GeneIDi538054.
KEGGibta:538054.

Organism-specific databases

CTDi54948.

Phylogenomic databases

eggNOGiKOG3422. Eukaryota.
COG0197. LUCA.
GeneTreeiENSGT00390000002038.
HOGENOMiHOG000021349.
HOVERGENiHBG056553.
InParanoidiQ3T0J3.
KOiK02878.
OMAiIRPPKMQ.
OrthoDBiEOG091G0KF0.
TreeFamiTF312969.

Enzyme and pathway databases

ReactomeiR-BTA-5368286. Mitochondrial translation initiation.
R-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Miscellaneous databases

EvolutionaryTraceiQ3T0J3.

Gene expression databases

BgeeiENSBTAG00000021188.

Family and domain databases

CDDicd01433. Ribosomal_L16_L10e. 1 hit.
Gene3Di3.90.1170.10. 1 hit.
InterProiIPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
[Graphical view]
PANTHERiPTHR12220. PTHR12220. 1 hit.
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
PRINTSiPR00060. RIBOSOMALL16.
SUPFAMiSSF54686. SSF54686. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRM16_BOVIN
AccessioniPrimary (citable) accession number: Q3T0J3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.