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Protein

39S ribosomal protein L16, mitochondrial

Gene

MRPL16

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-BTA-5389840 Mitochondrial translation elongation
R-BTA-5419276 Mitochondrial translation termination

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L16, mitochondrial
Short name:
L16mt
Short name:
MRP-L16
Gene namesi
Name:MRPL16
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 15

Organism-specific databases

VGNCiVGNC:31620 MRPL16

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 29Mitochondrion1 PublicationAdd BLAST29
ChainiPRO_000023984030 – 25139S ribosomal protein L16, mitochondrialAdd BLAST222

Proteomic databases

PaxDbiQ3T0J3
PRIDEiQ3T0J3

Expressioni

Gene expression databases

BgeeiENSBTAG00000021188

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.1 Publication1 Publication

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000028236

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FTCelectron microscopy-I71-188[»]
ProteinModelPortaliQ3T0J3
SMRiQ3T0J3
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ3T0J3

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3422 Eukaryota
COG0197 LUCA
GeneTreeiENSGT00390000002038
HOGENOMiHOG000021349
HOVERGENiHBG056553
InParanoidiQ3T0J3
KOiK02878
OMAiMFAIWRV
OrthoDBiEOG091G0KF0
TreeFamiTF312969

Family and domain databases

CDDicd01433 Ribosomal_L16_L10e, 1 hit
Gene3Di3.90.1170.10, 1 hit
InterProiView protein in InterPro
IPR016180 Ribosomal_L10e/L16
IPR036920 Ribosomal_L10e/L16_sf
IPR000114 Ribosomal_L16
PANTHERiPTHR12220 PTHR12220, 2 hits
PfamiView protein in Pfam
PF00252 Ribosomal_L16, 1 hit
PRINTSiPR00060 RIBOSOMALL16
SUPFAMiSSF54686 SSF54686, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q3T0J3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWRLLSGARA PVLRATLSDS WAAPPARAGL KTLLPVPTFE DVSIPEKPKL
60 70 80 90 100
RFVERAPLVP KVRREPKNLR DIRGPSTEAT EFTEGNFAIL ALGGGYLHWG
110 120 130 140 150
HFEMMRLTIN RFMDPKNMFA LWRVPAPFKA ITRKGMGQRM GGGKGAIDHY
160 170 180 190 200
VTPVKAGRLI VEVGGRCEFQ EVQGILNQVA HKLPFPAKAV SRETLEKIQK
210 220 230 240 250
DQEERERNNQ NPWTFERIAT ANMLGIRKVL SPYDLTHRGR YWGKFYMPER

V
Length:251
Mass (Da):28,573
Last modified:October 11, 2005 - v1
Checksum:i9C03E0163DF55229
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC102369 mRNA Translation: AAI02370.1
RefSeqiNP_001029813.1, NM_001034641.2
XP_015330464.1, XM_015474978.1
UniGeneiBt.4402

Genome annotation databases

EnsembliENSBTAT00000028236; ENSBTAP00000028236; ENSBTAG00000021188
GeneIDi538054
KEGGibta:538054

Similar proteinsi

Entry informationi

Entry nameiRM16_BOVIN
AccessioniPrimary (citable) accession number: Q3T0J3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: October 11, 2005
Last modified: March 28, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

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