Q3T083 (SDF2L_BOVIN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Stromal cell-derived factor 2-like protein 1
Short name=SDF2-like protein 1

Gene names

Name:

SDF2L1

Organism

Bos taurus (Bovine) [Reference proteome]

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	221 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location	Endoplasmic reticulum lumen Potential.
Sequence similarities	Contains 3 MIR domains.

Ontologies

Keywords
Cellular component	Endoplasmic reticulum
Domain	Repeat Signal
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	endoplasmic reticulum lumen Inferred from electronic annotation. Source: UniProtKB-SubCell membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 28	28	Potential
	Chain	29 – 221	193	Stromal cell-derived factor 2-like protein 1		PRO_0000331218
Regions
	Domain	33 – 87	55	MIR 1
	Domain	95 – 150	56	MIR 2
	Domain	151 – 205	55	MIR 3
	Motif	218 – 221	4	Prevents secretion from ER Potential

Sequences

	Sequence		Length	Mass (Da)
	Q3T083 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 79943DE6824B641E	FASTA	221	23,557
	10 20 30 40 50 60 MWSAGSGRAA GPALLGILLA LSLSGGRAAK SDAGLVTCGS VLKLFNTQHR VRLHSHDIKY 70 80 90 100 110 120 GSGSGQQSVT GVEASDDANS YWRIRGGTEG ECPRGSPVRC GQAVRLTHVL TGKNLHTHHF 130 140 150 160 170 180 PSPLTNNQEV SAFGEDGEGD DLDLWTVRCS GQHWEREAAV RFQHVGTSVF LSVTGEQYGS 190 200 210 220 PIRGQHEVHG MASASAHNKW KAMEGIFIKP SPEAPGGHDE L

References

[1]	NIH - Mammalian Gene Collection (MGC) project Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: Crossbred X Angus. Tissue: Liver.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC102528 mRNA. Translation: AAI02529.1.
IPI	IPI00697041.
RefSeq	NP_001030400.1. NM_001035323.1.
UniGene	Bt.16378.
3D structure databases
ProteinModelPortal	Q3T083.
SMR	Q3T083. Positions 31-206.
ModBase	Search...
Protein-protein interaction databases
STRING	9913.ENSBTAP00000000074.
Proteomic databases
PRIDE	Q3T083.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSBTAT00000000074; ENSBTAP00000000074; ENSBTAG00000000067.
GeneID	517962.
KEGG	bta:517962.
Organism-specific databases
CTD	23753.
Phylogenomic databases
eggNOG	NOG136457.
GeneTree	ENSGT00510000046663.
HOGENOM	HOG000236354.
HOVERGEN	HBG024385.
InParanoid	Q3T083.
OMA	CGQAIRI.
OrthoDB	EOG4NVZMD.
Family and domain databases
InterPro	IPR027005. GlyclTrfase_39_like. IPR016093. MIR_motif. [Graphical view]
PANTHER	PTHR10050. PTHR10050. 1 hit.
Pfam	PF02815. MIR. 1 hit. [Graphical view]
SMART	SM00472. MIR. 3 hits. [Graphical view]
SUPFAM	SSF82109. MIR. 1 hit.
PROSITE	PS00014. ER_TARGET. 1 hit. PS50919. MIR. 3 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	20872550.

Entry information

Entry name

SDF2L_BOVIN

Accession

Primary (citable) accession number: Q3T083

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 29, 2008
Last sequence update:	October 11, 2005
Last modified:	April 3, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program