Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Tetratricopeptide repeat protein 36

Gene

TTC36

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Tetratricopeptide repeat protein 36
Short name:
TPR repeat protein 36
Gene namesi
Name:TTC36
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 15

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 188188Tetratricopeptide repeat protein 36PRO_0000332178Add
BLAST

Proteomic databases

PaxDbiQ3SZV0.
PRIDEiQ3SZV0.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000019835.

Structurei

3D structure databases

ProteinModelPortaliQ3SZV0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati50 – 8334TPR 1Add
BLAST
Repeati85 – 11733TPR 2Add
BLAST
Repeati122 – 15534TPR 3Add
BLAST

Sequence similaritiesi

Belongs to the TTC36 family.Curated
Contains 3 TPR repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, TPR repeat

Phylogenomic databases

eggNOGiKOG4555. Eukaryota.
ENOG4111VN1. LUCA.
GeneTreeiENSGT00390000007968.
HOGENOMiHOG000031109.
HOVERGENiHBG106742.
InParanoidiQ3SZV0.
OMAiPNTPFGD.
OrthoDBiEOG7QG45H.
TreeFamiTF105820.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
SMARTiSM00028. TPR. 3 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 1 hit.
PROSITEiPS50005. TPR. 3 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3SZV0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTPNDQAVL QAIFNPDSPF GDIVGLDLGE EAEKEVDEGE VFPRAQLEQS
60 70 80 90 100
KALELQAVIA AEAGDLSTAL ERFGQAINLL PERASAYNNR AQARRLQGDV
110 120 130 140 150
AGALEDLERA LALSGGRGRT ARQGFVQRGL VARLQGRDDD ARRDFERAAR
160 170 180
LGSPFARRQL VLLNPYAALC NRMLADVMGQ LRRPCDER
Length:188
Mass (Da):20,558
Last modified:October 11, 2005 - v1
Checksum:i87D4EFFED7C4D799
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC102694 mRNA. Translation: AAI02695.1.
RefSeqiNP_001035605.1. NM_001040515.2.
UniGeneiBt.74299.

Genome annotation databases

EnsembliENSBTAT00000019835; ENSBTAP00000019835; ENSBTAG00000014899.
GeneIDi510592.
KEGGibta:510592.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC102694 mRNA. Translation: AAI02695.1.
RefSeqiNP_001035605.1. NM_001040515.2.
UniGeneiBt.74299.

3D structure databases

ProteinModelPortaliQ3SZV0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000019835.

Proteomic databases

PaxDbiQ3SZV0.
PRIDEiQ3SZV0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000019835; ENSBTAP00000019835; ENSBTAG00000014899.
GeneIDi510592.
KEGGibta:510592.

Organism-specific databases

CTDi143941.

Phylogenomic databases

eggNOGiKOG4555. Eukaryota.
ENOG4111VN1. LUCA.
GeneTreeiENSGT00390000007968.
HOGENOMiHOG000031109.
HOVERGENiHBG106742.
InParanoidiQ3SZV0.
OMAiPNTPFGD.
OrthoDBiEOG7QG45H.
TreeFamiTF105820.

Miscellaneous databases

NextBioi20869525.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
SMARTiSM00028. TPR. 3 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 1 hit.
PROSITEiPS50005. TPR. 3 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Mammalian Gene Collection (MGC) project
    Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Hereford.
    Tissue: Testis.

Entry informationi

Entry nameiTTC36_BOVIN
AccessioniPrimary (citable) accession number: Q3SZV0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: October 11, 2005
Last modified: May 11, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.