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Protein

Uncharacterized protein C2orf42 homolog

Gene
N/A
Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C2orf42 homolog
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 11

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 574574Uncharacterized protein C2orf42 homologPRO_0000300120Add
BLAST

Proteomic databases

PaxDbiQ3SYX3.
PRIDEiQ3SYX3.

Expressioni

Gene expression databases

BgeeiENSBTAG00000016939.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IG2U. Eukaryota.
ENOG410YECK. LUCA.
GeneTreeiENSGT00390000011031.
HOGENOMiHOG000060318.
HOVERGENiHBG100869.
InParanoidiQ3SYX3.
OMAiVENQCQH.
OrthoDBiEOG091G058P.
TreeFamiTF323774.

Family and domain databases

InterProiIPR026049. C2orf42.
IPR029269. Zf-tcix.
[Graphical view]
PANTHERiPTHR13518. PTHR13518. 1 hit.
PfamiPF14952. zf-tcix. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3SYX3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPNSLRTKV PAFLSDLGKA TLRGIRKCPR CGTYNGTRGL SCKNKTCGTI
60 70 80 90 100
FRYGARKQPS VEAVKIITGS DLQVYSVRQR DRGPDYRCFV ELGVSETTIQ
110 120 130 140 150
TVDGTIITQL SSGRCYVPSC LKAATQGVVE NQCQHIKLAV NCQAEATPLT
160 170 180 190 200
LKSSVLNAMQ ASPETKQTIW QLATEPTGPL VQRITKNILV VKCKASQKHS
210 220 230 240 250
LGYLHTSFVQ KIGAKSLPER RFFCSCQTLK SHKSNASKDE AVQRCIHFFA
260 270 280 290 300
CICAFASDET LAQEFSDFLN FDSSGLKEVI VPQLGCHSES PVSACESTAS
310 320 330 340 350
KPKKRKKEEV SGAQTNSSLL PPDTVSSNLR KSGLKKPVVA SSLKRQACGQ
360 370 380 390 400
LLDEAQVTLS FQDWLASVTE RIHQTMHYQF DGKPEPLVFH IPQSFFDALQ
410 420 430 440 450
QRISIGSAKK RLPNSTTAFI RKDALPLGTF SKYTWHITNI LQVKQILDTP
460 470 480 490 500
EMPLEITRSF IQNRDGTYEL FKCPKVEVES IAETYGRIEK QPVLRPLELK
510 520 530 540 550
TFLKVGNTSP DQKEPTPFII EWIPDILPQS KIGELRIKFE YGHHRNGHVA
560 570
EYQDQRPPLD QPLELAPLTT ITFP
Length:574
Mass (Da):64,034
Last modified:October 11, 2005 - v1
Checksum:iD5DB0F96730EAF7D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC103343 mRNA. Translation: AAI03344.1.
RefSeqiNP_001029886.1. NM_001034714.2.
XP_005212933.1. XM_005212876.3.
UniGeneiBt.48883.

Genome annotation databases

EnsembliENSBTAT00000022529; ENSBTAP00000022529; ENSBTAG00000016939.
GeneIDi540909.
KEGGibta:540909.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC103343 mRNA. Translation: AAI03344.1.
RefSeqiNP_001029886.1. NM_001034714.2.
XP_005212933.1. XM_005212876.3.
UniGeneiBt.48883.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ3SYX3.
PRIDEiQ3SYX3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000022529; ENSBTAP00000022529; ENSBTAG00000016939.
GeneIDi540909.
KEGGibta:540909.

Organism-specific databases

CTDi540909.

Phylogenomic databases

eggNOGiENOG410IG2U. Eukaryota.
ENOG410YECK. LUCA.
GeneTreeiENSGT00390000011031.
HOGENOMiHOG000060318.
HOVERGENiHBG100869.
InParanoidiQ3SYX3.
OMAiVENQCQH.
OrthoDBiEOG091G058P.
TreeFamiTF323774.

Gene expression databases

BgeeiENSBTAG00000016939.

Family and domain databases

InterProiIPR026049. C2orf42.
IPR029269. Zf-tcix.
[Graphical view]
PANTHERiPTHR13518. PTHR13518. 1 hit.
PfamiPF14952. zf-tcix. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCB042_BOVIN
AccessioniPrimary (citable) accession number: Q3SYX3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.