Q3SYR7 (RL9_BOVIN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
60S ribosomal protein L9

Gene names

Name:

RPL9

Organism

Bos taurus (Bovine) [Reference proteome]

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	192 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities	Belongs to the ribosomal protein L6P family.
Sequence caution	The sequence AAI03428.2 differs from that shown. Reason: Erroneous initiation. The sequence AAW82089.1 differs from that shown. Reason: Frameshift at position 32.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
PTM	Acetylation
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 192	192	60S ribosomal protein L9		PRO_0000230773
Amino acid modifications
	Modified residue	121	1	N6-acetyllysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q3SYR7 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: C2E89ABBC420EF61	FASTA	192	21,876
	10 20 30 40 50 60 MKTILSNQTV DIPENVDINL KGRTVIVKGP RGTLRRDFNH INVELSLLGK KKKRLRVDKW 70 80 90 100 110 120 WGNRKELATV RTICSHVQNM IKGVTLGFRY KMRSVYAHFP INVVIQENGS LVEIRNFLGE 130 140 150 160 170 180 KYIRRVRMRP GVACSVSQAQ KDELILEGND IELVSNSAAL IQQATTVKNK DIRKFLDGIY 190 VSEKGTVQQA DE

References

[1]	"Analysis of sequences obtained from constructed full-length bovine cDNA libraries." Yu J., Meng Y., Wang Z., Hansen C., Li C., Moore S.S. Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Lymphoid epithelium.
[2]	NIH - Mammalian Gene Collection (MGC) project Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: Hereford. Tissue: Testis.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY911321 mRNA. Translation: AAW82089.1. Frameshift. BC103427 mRNA. Translation: AAI03428.2. Different initiation.
IPI	IPI00686559.
RefSeq	NP_001019640.2. NM_001024469.3.
UniGene	Bt.48917.
3D structure databases
ProteinModelPortal	Q3SYR7.
SMR	Q3SYR7. Positions 10-184.
ModBase	Search...
Proteomic databases
PaxDb	Q3SYR7.
PRIDE	Q3SYR7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSBTAT00000019298; ENSBTAP00000019298; ENSBTAG00000014518.
GeneID	282884.
KEGG	bta:282884.
Organism-specific databases
CTD	6133.
Phylogenomic databases
eggNOG	COG0097.
GeneTree	ENSGT00390000015224.
HOGENOM	HOG000039905.
HOVERGEN	HBG000942.
InParanoid	Q3SYR7.
KO	K02940.
OMA	AVRTVCS.
OrthoDB	EOG4T4CWJ.
Family and domain databases
Gene3D	3.90.930.12. 2 hits.
InterPro	IPR000702. Ribosomal_L6. IPR020040. Ribosomal_L6_a/b-dom. IPR002359. Ribosomal_L6_CS2. [Graphical view]
PANTHER	PTHR11655. PTHR11655. 1 hit.
Pfam	PF00347. Ribosomal_L6. 2 hits. [Graphical view]
PIRSF	PIRSF002162. Ribosomal_L6. 1 hit.
SUPFAM	SSF56053. Ribosomal_L6. 2 hits.
PROSITE	PS00700. RIBOSOMAL_L6_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20806412.

Entry information

Entry name

RL9_BOVIN

Accession

Primary (citable) accession number: Q3SYR7
Secondary accession number(s): Q56K06

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	October 11, 2005
Last modified:	April 3, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program