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Protein
Submitted name:

Cntnap2 protein

Gene

Cntnap2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cntnap2 proteinImported
Submitted name:
Contactin associated protein-like 2, isoform CRA_aImported
Gene namesi
Name:Cntnap2Imported
ORF Names:mCG_2030Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1914047. Cntnap2.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei39 – 6022HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000039419.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000110288.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini59 – 77194.1mInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3516. Eukaryota.
ENOG410XPHG. LUCA.
HOVERGENiHBG084355.

Family and domain databases

InterProiIPR029831. Caspr2.
IPR003585. Neurexin-like.
[Graphical view]
PANTHERiPTHR10127:SF644. PTHR10127:SF644. 1 hit.
SMARTiSM00294. 4.1m. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3SYI6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSATDPWHL DHLDSASADF PYNPGQGQAI RNGVNRNSAI IGGVIAVVIF
60 70 80 90 100
TILCTLVFLI RYMFRHKGTY HTNEAKGAES AESADAAIMN NDPNFTETID

ESKKEWLI
Length:108
Mass (Da):11,899
Last modified:October 11, 2005 - v1
Checksum:iF0EB322C735B773E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC103799 mRNA. Translation: AAI03800.1.
CH466533 Genomic DNA. Translation: EDL13439.1.
RefSeqiNP_080047.1. NM_025771.3.
UniGeneiMm.440084.

Genome annotation databases

GeneIDi66797.
UCSCiuc009bsx.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC103799 mRNA. Translation: AAI03800.1.
CH466533 Genomic DNA. Translation: EDL13439.1.
RefSeqiNP_080047.1. NM_025771.3.
UniGeneiMm.440084.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000110288.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi66797.
UCSCiuc009bsx.2. mouse.

Organism-specific databases

CTDi26047.
MGIiMGI:1914047. Cntnap2.

Phylogenomic databases

eggNOGiKOG3516. Eukaryota.
ENOG410XPHG. LUCA.
HOVERGENiHBG084355.

Miscellaneous databases

ChiTaRSiCntnap2. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000039419.

Family and domain databases

InterProiIPR029831. Caspr2.
IPR003585. Neurexin-like.
[Graphical view]
PANTHERiPTHR10127:SF644. PTHR10127:SF644. 1 hit.
SMARTiSM00294. 4.1m. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3SYI6_MOUSE
AccessioniPrimary (citable) accession number: Q3SYI6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.