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Protein

Solute carrier family 41 member 3

Gene

Slc41a3

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Solute carrier family 41 member 3
Gene namesi
Name:Slc41a3
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 4

Organism-specific databases

RGDi1589573. Slc41a3.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei41 – 6121HelicalSequence analysisAdd
BLAST
Transmembranei121 – 14121HelicalSequence analysisAdd
BLAST
Transmembranei163 – 18321HelicalSequence analysisAdd
BLAST
Transmembranei194 – 21421HelicalSequence analysisAdd
BLAST
Transmembranei225 – 24521HelicalSequence analysisAdd
BLAST
Transmembranei258 – 27821HelicalSequence analysisAdd
BLAST
Transmembranei351 – 37121HelicalSequence analysisAdd
BLAST
Transmembranei380 – 40021HelicalSequence analysisAdd
BLAST
Transmembranei424 – 44421HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 462462Solute carrier family 41 member 3PRO_0000295594Add
BLAST

Proteomic databases

PaxDbiQ3SWT5.
PRIDEiQ3SWT5.

PTM databases

iPTMnetiQ3SWT5.

Expressioni

Gene expression databases

ExpressionAtlasiQ3SWT5. baseline and differential.
GenevisibleiQ3SWT5. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000065688.

Structurei

3D structure databases

ProteinModelPortaliQ3SWT5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SLC41A transporter family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG3788. Eukaryota.
ENOG410XSTG. LUCA.
GeneTreeiENSGT00390000016816.
HOVERGENiHBG057187.
InParanoidiQ3SWT5.
KOiK15122.
OMAiTQLNLEF.
OrthoDBiEOG78SQJ1.
PhylomeDBiQ3SWT5.

Family and domain databases

Gene3Di1.10.357.20. 2 hits.
InterProiIPR006667. SLC41_membr_dom.
[Graphical view]
PfamiPF01769. MgtE. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3SWT5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVTQLSLEF RFQGKKLRGF SCELTRSPHG VLPESVLSTT CQVAIPILLS
60 70 80 90 100
GLGMMTAGLV MNTVQHWPVF RDVKDLLTLV PPLVGLKGNL EMTLASRLST
110 120 130 140 150
SANTGQIDDR QERYRIISSN LAVVQVQATV VGLLAAVASL MLGTVSHEEF
160 170 180 190 200
DWAKVALLCT SSVITAFLAA LALGILMICI VIGARKFGVN PDNIATPIAA
210 220 230 240 250
SLGDLITLSI LALMSSFFYS HRDTWYLTPL VCIGFLALTP LWIFIAKQNP
260 270 280 290 300
PIMKILKYGW FPIILAMIIS SFGGLILSKT ISKHQFKGMA VLTPVICGVG
310 320 330 340 350
GNLVAIQTSR ISTFLHMWST PGVLPVQMKR FWPNPCFTFC SSEINSVSAR
360 370 380 390 400
VLLFLVVPGH LIFFYLICLV EGQSVTSSKI FVLLYLMAGM MQVVILLYLA
410 420 430 440 450
EVMVRLTWHQ ALDPDNHCIP YLTGLGDLLG TSLLALCFLL DWLLRGRANL
460
AELVSELVSV PP
Length:462
Mass (Da):50,526
Last modified:October 11, 2005 - v1
Checksum:i859CBE325A6E936F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC104698 mRNA. Translation: AAI04699.1.
RefSeqiNP_001032569.1. NM_001037492.1.
XP_006236937.1. XM_006236875.2.
XP_008761356.1. XM_008763134.1.
UniGeneiRn.190829.

Genome annotation databases

EnsembliENSRNOT00000073268; ENSRNOP00000065688; ENSRNOG00000045821.
GeneIDi641603.
KEGGirno:641603.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC104698 mRNA. Translation: AAI04699.1.
RefSeqiNP_001032569.1. NM_001037492.1.
XP_006236937.1. XM_006236875.2.
XP_008761356.1. XM_008763134.1.
UniGeneiRn.190829.

3D structure databases

ProteinModelPortaliQ3SWT5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000065688.

PTM databases

iPTMnetiQ3SWT5.

Proteomic databases

PaxDbiQ3SWT5.
PRIDEiQ3SWT5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000073268; ENSRNOP00000065688; ENSRNOG00000045821.
GeneIDi641603.
KEGGirno:641603.

Organism-specific databases

CTDi54946.
RGDi1589573. Slc41a3.

Phylogenomic databases

eggNOGiKOG3788. Eukaryota.
ENOG410XSTG. LUCA.
GeneTreeiENSGT00390000016816.
HOVERGENiHBG057187.
InParanoidiQ3SWT5.
KOiK15122.
OMAiTQLNLEF.
OrthoDBiEOG78SQJ1.
PhylomeDBiQ3SWT5.

Miscellaneous databases

PROiQ3SWT5.

Gene expression databases

ExpressionAtlasiQ3SWT5. baseline and differential.
GenevisibleiQ3SWT5. RN.

Family and domain databases

Gene3Di1.10.357.20. 2 hits.
InterProiIPR006667. SLC41_membr_dom.
[Graphical view]
PfamiPF01769. MgtE. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.

Entry informationi

Entry nameiS41A3_RAT
AccessioniPrimary (citable) accession number: Q3SWT5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: October 11, 2005
Last modified: July 6, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.