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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi11 – 16FADUniRule annotation6
Nucleotide bindingi270 – 284NADUniRule annotationAdd BLAST15

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:Nwi_0097
OrganismiNitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255)
Taxonomic identifieri323098 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeNitrobacter
Proteomesi
  • UP000002531 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000166291 – 623tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGAdd BLAST623

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi323098.Nwi_0097.

Structurei

3D structure databases

ProteinModelPortaliQ3SWH6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3SWH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTASFDVIVI GGGHAGCEAA AASARTGART ALVTHRFATI GAMSCNPAIG
60 70 80 90 100
GLGKGHLVRE VDALDGLMAR IADAGGIQFR MLNRRKGPAV RGPRAQEDRK
110 120 130 140 150
LYAAAMQAAI RETANLEVID GEADDLIVSG GRIAGVRLTD GRRIKSAAVV
160 170 180 190 200
VTTGTFLRGL IHLGEKSWPA GRVDEAPALG LSASFERIGF ALGRLKTGTP
210 220 230 240 250
PRLDGTTIDW AAVEMQPGDD PPEPFSVLTA RITTPQIQCG ITRTTPATHD
260 270 280 290 300
LIRTNVHRSP IYSGQITSSG PRYCPSIEDK VVRFGDRDGH QVFLEPEGLD
310 320 330 340 350
DATVYPNGIS TSLPEEVQLA ILATIPGLEN VKMTRPGYAI EYDHVDPREL
360 370 380 390 400
EPTLQTRRMR GLFLAGQING TTGYEEAAAQ GLVAGLNAAL AAGGGDPVVF
410 420 430 440 450
DRADGYLGVM IDDLVTRGIT EPYRMFTSRA EYRLTLRADN ADQRLTDRGI
460 470 480 490 500
ALGCVGAGRA AYHRAKMAAL QAAKQGAMSL SVTPNEAARH GLSLNRDGHR
510 520 530 540 550
RSAFELLSYP EIGWREVAAI WPELSAIDPA IAEHLEIDAK YDVYLKRQAA
560 570 580 590 600
DVEAFRRDEG LVLTEIDYSA VPGLSNEARN RLEKAQPLTV GQAGRLDGIT
610 620
PAALGILAAY LRREARQRTA ASA
Length:623
Mass (Da):66,650
Last modified:October 11, 2005 - v1
Checksum:iECD4A6E6FA676D74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000115 Genomic DNA. Translation: ABA03365.1.
RefSeqiWP_011313434.1. NC_007406.1.

Genome annotation databases

EnsemblBacteriaiABA03365; ABA03365; Nwi_0097.
KEGGinwi:Nwi_0097.
PATRICi22696511. VBINitWin102302_0111.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000115 Genomic DNA. Translation: ABA03365.1.
RefSeqiWP_011313434.1. NC_007406.1.

3D structure databases

ProteinModelPortaliQ3SWH6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi323098.Nwi_0097.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA03365; ABA03365; Nwi_0097.
KEGGinwi:Nwi_0097.
PATRICi22696511. VBINitWin102302_0111.

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMNMG_NITWN
AccessioniPrimary (citable) accession number: Q3SWH6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 11, 2005
Last modified: November 2, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.