Q3SVL8 (RL28_NITWN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L28

Gene names

Name:	rpmB
Ordered Locus Names:	Nwi_0406

Organism

Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) [Complete proteome] [HAMAP]

Taxonomic identifier

323098 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter

Protein attributes

Sequence length	97 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 97	97	50S ribosomal protein L28 HAMAP MF_00373		PRO_1000007289

Sequences

	Sequence		Length	Mass (Da)
	Q3SVL8 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: EA4374E3794FCA56	FASTA	97	10,856
	10 20 30 40 50 60 MSRRCELTAK APLVGHKVSH SNIKTKRRFL PNLVNVTFVS ETLSSSVRFR VSTHALRSVD 70 80 90 HRGGFDAFLL KARDSELSPK AIELKRQIQK KQAAKAG

References

[1]

"Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255." Starkenburg S.R., Chain P.S.G., Sayavedra-Soto L.A., Hauser L., Land M.L., Larimer F.W., Malfatti S.A., Klotz M.G., Bottomley P.J., Arp D.J., Hickey W.J. Appl. Environ. Microbiol. 72:2050-2063(2006) [PubMed: 16517654] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nb-255 / ATCC 25391.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000115 Genomic DNA. Translation: ABA03673.1.
RefSeq	YP_317025.1. NC_007406.1.
3D structure databases
ProteinModelPortal	Q3SVL8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3SVL8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3676991.
GenomeReviews	Gene locus Nwi_0406 in contig CP000115_GR.
KEGG	nwi:Nwi_0406.
NMPDR	fig|323098.3.peg.577.
PATRIC	22697192. VBINitWin102302_0446.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0227.
HOGENOM	HBG597003.
OMA	ELSMRAR.
PhylomeDB	Q3SVL8.
ProtClustDB	PRK00359.
Enzyme and pathway databases
BioCyc	NWIN323098:NWI_0406-MONOMER.
Family and domain databases
HAMAP	MF_00373. Ribosomal_L28. [Tree]
InterPro	IPR001383. Ribosomal_L28. [Graphical view]
KO	K02902.
Pfam	PF00830. Ribosomal_L28. 1 hit. [Graphical view]
TIGRFAMs	TIGR00009. L28. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RL28_NITWN

Accession

Primary (citable) accession number: Q3SVL8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	October 11, 2005
Last modified:	January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program