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Q3STC1 (Q3STC1_NITWN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1094 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q3STC1 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 8EA29E353D0B3A97

FASTA1,094124,586
        10         20         30         40         50         60 
MNEMSHIDAD RYVQTDDLWY KDAIIYQLHV KAFADSNNDG IGDFVGLTNK LDYLQELGVT 

        70         80         90        100        110        120 
ALWLLPFYPS PGRDDGYDIA DYGSVNPDFG TMKDFRRFIS EAKRRGLRVI TELVINHTSD 

       130        140        150        160        170        180 
QHRWFKRAQR SPAGSSARNW YVWSNTDKKY QGTRIIFTDT EKSNWAWDSE ANAYYWHRFF 

       190        200        210        220        230        240 
SHQPDLNFDN PRVVRAVIQV MKRWLDTGVD GFRLDAIPYL CEREGTNNEN LPETHAVIKH 

       250        260        270        280        290        300 
IRAALDSYAK GKVLLAEANQ WPEDVQFYFG DGDECHMAYH FPLMPRIYMA IAQEDRFPIT 

       310        320        330        340        350        360 
DILRQTPDIP DNCQWAMFLR NHDELTLEMV TDIERDYLWS TYAADPRARI NLGIRRRLAP 

       370        380        390        400        410        420 
LMDNDRRKIE LMNSLLMSLP GTPIIYYGDE IGMGDNIYLG DRNGVRTPMQ WTSDRNGGFS 

       430        440        450        460        470        480 
RCDPARLYAP PVMDAVYGYE SVNVESQSRS LSSLLSWMKK LISVRKSSHV FGRGTMAFVR 

       490        500        510        520        530        540 
SSNRSVLAYL RQHGDEAVLC VANLSRSAQA SELDLSHWKG RSPLEMLGRT TFPDIGELPY 

       550        560        570        580        590        600 
LITLAPYGFY WFRLNEKPPS PNVAAVIVPD YETLVVPQGA TWMSLARTRS IFERDVLPSH 

       610        620        630        640        650        660 
LARSRWFPER SAGAITARVP AAIPLTKDQV SRPWLSIFDV THRGQTGRYA MPIQIRWDRL 

       670        680        690        700        710        720 
DRKNYDARNV AAVRQGSREG TLIDAAYESG LITGIIEGLR QRATFEGGNL QISYIPTERL 

       730        740        750        760        770        780 
ASITEEPIEN VRPVQTEQSN STALVDQKFV VKLYRKLENG INPEVEVGRF LTDVAGYANT 

       790        800        810        820        830        840 
PALLGSVELT GPDVHAAVAI VHAFVGNQGD AWTISSAALD RFIDEQRLVG AIDTAPALEE 

       850        860        870        880        890        900 
KAAYQRYMMQ LGKRVAEMHV ALASRGDIED FRPEPVNASD VAHFIDRLTA RAEKTFDRLA 

       910        920        930        940        950        960 
QARLSESDRI LVEEIQSLRP ALHGLLAGLL PSSIQMYSIR HHGDFHLGQV LVVRDDVFII 

       970        980        990       1000       1010       1020 
DFEGEPRRSL SERRMKAPAA RDVAGLIRSI DYSVTSAQQR VLKTEVDDDG RLAEALSAWR 

      1030       1040       1050       1060       1070       1080 
DEATQTFLIA YREAMSDSRL WPQDNDESEG MLRFFLLEKA LYEIDYELAH RPDWLRVALD 

      1090 
GALRVLRNDK RDRA 

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References

[1]"Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255."
Starkenburg S.R., Chain P.S., Sayavedra-Soto L.A., Hauser L., Land M.L., Larimer F.W., Malfatti S.A., Klotz M.G., Bottomley P.J., Arp D.J., Hickey W.J.
Appl. Environ. Microbiol. 72:2050-2063(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nb-255 / ATCC 25391.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000115 Genomic DNA. Translation: ABA04470.1.
RefSeqYP_317822.1. NC_007406.1.

3D structure databases

ProteinModelPortalQ3STC1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323098.Nwi_1208.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA04470; ABA04470; Nwi_1208.
GeneID3675667.
KEGGnwi:Nwi_1208.
PATRIC22699036. VBINitWin102302_1353.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAGTRIIFT.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycNWIN323098:GJEG-1230-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3STC1_NITWN
AccessionPrimary (citable) accession number: Q3STC1
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 14, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)