Q3SSA9 (Q3SSA9_NITWN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonucleoside-diphosphate reductase class II EMBL ABA04832.1
EC=1.17.4.- EMBL ABA04832.1

Gene names

Ordered Locus Names:

Nwi_1571

Organism

Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) [Complete proteome] [HAMAP] EMBL ABA04832.1

Taxonomic identifier

323098 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter

Protein attributes

Sequence length	1265 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABA04832.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular component	ribonucleoside-diphosphate reductase complex Inferred from electronic annotation. Source: InterPro
Molecular function	cobalamin binding Inferred from electronic annotation. Source: InterPro cobalt ion binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro ribonucleoside-diphosphate reductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3SSA9 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 09C4B4488EF51F4A	FASTA	1,265	138,481
	10 20 30 40 50 60 MRFERRYTTD GQSPYAGIDF RLTTSEIRNP DGSVVFRLEN VEVPEFWSQV ASDVLAQKYF 70 80 90 100 110 120 RKAGVAARLK KVEEETVPSW LWRSVPDTDA LAALPESERI VGETSAKQVF DRLAGCWTYW 130 140 150 160 170 180 GWKGGYFTSE DDARAFHDEL RCMLARQMVA PNSPQWFNTG LHWAYGIDGP GQGHYYVDFK 190 200 210 220 230 240 TGKLTRSKSS YEHPQPHACF IQGIEDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSRLRG 250 260 270 280 290 300 EGERLSGGGR SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDADHPDI EQYIDWKVKE 310 320 330 340 350 360 EQKVAALVTG SRINQKHLKA VMRACVNCEG SGDDCFLPEK NPALRREIKL ARRAQVPDNY 370 380 390 400 410 420 IKRVIQFARQ GYKEIDFPVY DTDWDSEAYL TVSGQNSNNS VSLKDDFLRA VETDGDWNLI 430 440 450 460 470 480 GRTNRKVTKT LKARELWEKI GYAAWASADP GLHFNTTMND WHTCKASGDI RASNPCSEYM 490 500 510 520 530 540 FLDDTACNLA SANLITFYDT ASKQFDVEAY EHTVRLWTVV LEISVLMAQF PSKAIAALSY 550 560 570 580 590 600 EFRTLGLGFA NIGGLLMTMG LSYDSREGRA LCGALSAIMT GIAYRTSAEM AGELGAFPGH 610 620 630 640 650 660 KKNAGHMLRV IRNHRRAAHG QAHGYEALAV NPVPLDHASC PQADLIAHAT RAWDDALALG 670 680 690 700 710 720 EQHGYRNAQV TVVAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYWKI INRAVPEALR 730 740 750 760 770 780 ALGYRESEIA EIEAYAVGHG LLSNAPGINV STLKAKGFTD EAIAKVEKAL PTAFDIKFAF 790 800 810 820 830 840 NKWTFGEDFI RDTLGVDADA LASPAFDLLA AIGFSRREIE AANVHICGAM TVEGAPHLRA 850 860 870 880 890 900 EHYPVFDCAN PCGKIGKRYL SVESHIRMMA AAQPFISGAI SKTINMPNDA TVDDCKSAYL 910 920 930 940 950 960 LSWKLALKAN ALYRDGSKLS QPLNSQLIVD DDSDDDAIEA LMDKPMAART AQVAEKVVEK 970 980 990 1000 1010 1020 LVERIVVLRE RERMPDRRKG YTQKAVVGGH KVYVRTGEYD DGRLGEIFID MHKEGAALRS 1030 1040 1050 1060 1070 1080 FINNFAIAVS LGLQYGVPLE EYVDAFTFTR FEPAGPVQGN DSIKYATSIL DYVFRELAVS 1090 1100 1110 1120 1130 1140 YMGRYDLAHV DPSETGFDAL GKGVAEGKTP EGQQATRYVS KGLTRSRTDN LVVMRGGNDA 1150 1160 1170 1180 1190 1200 RGSSSSAAGD GGARTSVPSP LAGEGRAAAA SVTALSSSRA GDTLEGAAAL KQETGHDLSP 1210 1220 1230 1240 1250 1260 TERLEQQQRN KVAAPAIAPT KAERRAEAKA KGYEGEMCPE CANFTLVRNG TCMKCDTCGS TTGCS

References

[1]

"Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255." Starkenburg S.R., Chain P.S.G., Sayavedra-Soto L.A., Hauser L., Land M.L., Larimer F.W., Malfatti S.A., Klotz M.G., Bottomley P.J., Arp D.J., Hickey W.J. Appl. Environ. Microbiol. 72:2050-2063(2006) [PubMed: 16517654] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000115 Genomic DNA. Translation: ABA04832.1.
RefSeq	YP_318184.1. NC_007406.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q3SSA9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3676775.
GenomeReviews	Gene locus Nwi_1571 in contig CP000115_GR.
KEGG	nwi:Nwi_1571.
NMPDR	fig|323098.3.peg.2148.
PATRIC	22699858. VBINitWin102302_1756.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0209.
HOGENOM	HBG414188.
OMA	FLWRSVP.
PhylomeDB	Q3SSA9.
ProtClustDB	PRK07562.
Enzyme and pathway databases
BioCyc	NWIN323098:NWI_1571-MONOMER.
Family and domain databases
InterPro	IPR002876. DUF28. IPR017856. Integrase_Zn-bd_dom-like_N. IPR013344. RDP_Rdtase_AdoCbl-dep. IPR000788. Ribncl_red_lg_C. IPR013678. Ribonuc_red_2_N. IPR024434. TSCPD_dom. [Graphical view]
Gene3D	G3DSA:1.10.10.200. Intgrase_N_Zn_bd. 1 hit.
KO	K00525.
Pfam	PF08471. Ribonuc_red_2_N. 1 hit. PF02867. Ribonuc_red_lgC. 2 hits. PF12637. TSCPD. 1 hit. [Graphical view]
PRINTS	PR01183. RIBORDTASEM1.
SUPFAM	SSF75625. DUF28. 1 hit.
TIGRFAMs	TIGR02504. NrdJ_Z. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3SSA9_NITWN

Accession

Primary (citable) accession number: Q3SSA9

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)