Q3SS38 (Q3SS38_NITWN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
tRNA synthetase, class II (D, K and N) EMBL ABA04903.1
EC=6.1.1.6 EMBL ABA04903.1

Gene names

Ordered Locus Names:

Nwi_1642

Organism

Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) [Complete proteome] [HAMAP] EMBL ABA04903.1

Taxonomic identifier

323098 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter

Protein attributes

Sequence length	347 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 EMBL ABA04903.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3SS38 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 02A9603186ABD4D5	FASTA	347	38,579
	10 20 30 40 50 60 MERISSWWDQ SRHADRMPFL KARSAVTRAL RAWFDAQGFV EVETGVLQVS PGNETHLHAP 70 80 90 100 110 120 RTTLTTAAGD HLTRYLRTSP EFACKKLLAA GEQKIVEFAR VFRDRERGVL HLPEFTMLEW 130 140 150 160 170 180 YRAGGSYEAV MADCITVIAN AARATGIPRF SFRGRQADPL AEPERLTVTA AFERFAGIDL 190 200 210 220 230 240 LNTIVGREGD RTALAEAARE RVRITDDDTW SDIFSKVLVE HVEPHLGQGR LTVLSDYPAP 250 260 270 280 290 300 EAALARISPS DSRVAERFEI YACGVELANG FGELTDAAEQ RIRFAQAMDD KQIRYGERYP 310 320 330 340 LDEDFLAAVA RMPEAGGVAL GLDRLVMLAS GASRIDQVVW TPPAEEA

References

[1]

"Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255." Starkenburg S.R., Chain P.S.G., Sayavedra-Soto L.A., Hauser L., Land M.L., Larimer F.W., Malfatti S.A., Klotz M.G., Bottomley P.J., Arp D.J., Hickey W.J. Appl. Environ. Microbiol. 72:2050-2063(2006) [PubMed: 16517654] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000115 Genomic DNA. Translation: ABA04903.1.
RefSeq	YP_318255.1. NC_007406.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q3SS38.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3675434.
GenomeReviews	Gene locus Nwi_1642 in contig CP000115_GR.
KEGG	nwi:Nwi_1642.
NMPDR	fig|323098.3.peg.1202.
PATRIC	22700016. VBINitWin102302_1833.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2269.
HOGENOM	HBG631383.
OMA	MPEASGI.
PhylomeDB	Q3SS38.
ProtClustDB	CLSK864945.
Enzyme and pathway databases
BioCyc	NWIN323098:NWI_1642-MONOMER.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. IPR018149. Lys-tRNA-synth_II_C. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PRINTS	PR00982. TRNASYNTHLYS.
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3SS38_NITWN

Accession

Primary (citable) accession number: Q3SS38

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	December 14, 2011
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)