Q3SM12 (Q3SM12_THIDA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase EMBL AAZ96240.1

Gene names

Ordered Locus Names:

Tbd_0287

Organism

Thiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP] EMBL AAZ96240.1

Taxonomic identifier

292415 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Hydrogenophilales › Hydrogenophilaceae › Thiobacillus

Protein attributes

Sequence length	277 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3SM12 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 62AC7B0FE5AD349E	FASTA	277	32,121
	10 20 30 40 50 60 MKNALSVDVE DYFQVSAFAP HIPREQWNTL PCRVERNVDL ILDLFDESRS KATFFTLGWI 70 80 90 100 110 120 AERYPQVVRR IVDNGHELAS HGYGHERASD LTPAAFREDI TRAKRILEDL GGVAVRGYRA 130 140 150 160 170 180 PSFSIDHRNW WAVAELEEAG YVYSSSIYPV RHDHYGMPDA PRFPHRPNGE RGILEVPPTT 190 200 210 220 230 240 LPLFGRNLPA AGGGWFRLLP YEMSRWMLKR VNARDGAPCM FYFHPWEVDP EQPRPSGVSM 250 260 270 KARFRHYVNL QRTAGRLRRL LNDFEWDRVD RVFLGEP

References

[1]

"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans." Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P. J. Bacteriol. 188:1473-1488(2006) [PubMed: 16452431] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000116 Genomic DNA. Translation: AAZ96240.1.
RefSeq	YP_314045.1. NC_007404.1.
3D structure databases
ProteinModelPortal	Q3SM12.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3SM12.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3671429.
GenomeReviews	Gene locus Tbd_0287 in contig CP000116_GR.
KEGG	tbd:Tbd_0287.
NMPDR	fig|292415.3.peg.437.
PATRIC	23966715. VBIThiDen82923_0289.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0726.
HOGENOM	HBG612640.
OMA	VEDYFQV.
Enzyme and pathway databases
BioCyc	TDEN292415:TBD_0287-MONOMER.
Family and domain databases
InterPro	IPR022560. DUF3473. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR014344. PEP-CTERM_polysacc_deacetyl. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF11959. DUF3473. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR03006. PepC_polyde. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3SM12_THIDA

Accession

Primary (citable) accession number: Q3SM12

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)