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Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Tbd_0660

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-675-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Tbd_0660Imported
OrganismiThiobacillus denitrificans (strain ATCC 25259)Imported
Taxonomic identifieri292415 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus
ProteomesiUP000008291: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi292415.Tbd_0660.

Structurei

3D structure databases

ProteinModelPortaliQ3SL08.
SMRiQ3SL08. Positions 323-546.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
OMAiETSSTMT.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3SL08-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MCARPDCHAS RGCHAARLQC ARWGDCASMH RGRTMTLVNM KIGTRLGTGF
60 70 80 90 100
GAVLLLTLAV AGLGLAYLSQ IQRHVDDVAG SRMGKIKLVN GMRDAMQSGA
110 120 130 140 150
VAVRNLVLLT DEGAMAEEAQ RFLAHRARYA DAAAKLATAV RSPAETSVYD
160 170 180 190 200
KIAAARARTE PALDKVREFA MGNPLEATRV LVEEVRPLQQ QWLAALEEMA
210 220 230 240 250
ALQERGAAVA MVDAADAYAN AFSILLVLSL GAVVTGAGVA WRITRSVTEP
260 270 280 290 300
VRKAVALARS VAGGDLTARG ESRADDEFGQ LQRALTGMTA SLAGIVAEVR
310 320 330 340 350
HTTDTIAVAS REIASGNADL SSRTESQASS LEETASSMEE LTSTVRQNAE
360 370 380 390 400
NARQANQLVV STADVAVKGG EVVGQVVDTM ASIKDSSRKI SDIIGVIDGI
410 420 430 440 450
AFQTNILALN AAVEAARAGE QGRGFAVVAS EVRNLAQRSA GAAKEIKSLI
460 470 480 490 500
EDSVGKVDAG SKLVDEAGKT MDEIVSSVKR VTDIMSEIAA ASQEQSAGIE
510 520 530 540 550
QVNQAVGQMD EMTQQNAALV EEAAAAAESL QEQAAKLADA VSVFKLDGGD
560 570 580
GERLGVAAPV ARASVRRATS LQVAKARAPR LALVAR
Length:586
Mass (Da):61,309
Last modified:October 11, 2005 - v1
Checksum:iA3729E9E0DD4288C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ96613.1.
RefSeqiYP_314418.1. NC_007404.1.

Genome annotation databases

EnsemblBacteriaiAAZ96613; AAZ96613; Tbd_0660.
GeneIDi3672625.
KEGGitbd:Tbd_0660.
PATRICi23967481. VBIThiDen82923_0661.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ96613.1.
RefSeqiYP_314418.1. NC_007404.1.

3D structure databases

ProteinModelPortaliQ3SL08.
SMRiQ3SL08. Positions 323-546.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292415.Tbd_0660.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ96613; AAZ96613; Tbd_0660.
GeneIDi3672625.
KEGGitbd:Tbd_0660.
PATRICi23967481. VBIThiDen82923_0661.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
OMAiETSSTMT.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-675-MONOMER.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
    Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
    J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25259Imported.

Entry informationi

Entry nameiQ3SL08_THIDA
AccessioniPrimary (citable) accession number: Q3SL08
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: February 4, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.