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Q3SJM9 (Q3SJM9_THIDA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Tbd_1172 EMBL AAZ97125.1
OrganismThiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP] EMBL AAZ97125.1
Taxonomic identifier292415 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus

Protein attributes

Sequence length1095 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q3SJM9 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: E8207596865E104A

FASTA1,095124,584
        10         20         30         40         50         60 
MEENDPLWYK DAIVYELHVK AFFDANGDGA GDFRGLISKL DYLQELGVNA LWLLPFYPSP 

        70         80         90        100        110        120 
GRDDGYDISD YHNLHPSFGD MADFRRFIRE AHQRGLRVIT ELVVNHTSDQ HPWFQAARRA 

       130        140        150        160        170        180 
PPGSVKRNYY VWSDTDTRFS ETRIIFSDTE KSNWAWDEVA QAYYWHRFFS HQPDLNFNNP 

       190        200        210        220        230        240 
HVFKAIMRTM RFWFDAGVDG MRLDAVPYLC ERDGTSNENL PETHAVIRRM RAELDARYSN 

       250        260        270        280        290        300 
RMFLAEANQW PEDVREYFGN GDECHMAYHF PLMPRMYMAI AQEDRHPIVE IMEQTPDIPD 

       310        320        330        340        350        360 
LCQWAVFLRN HDELTLEMVT DRERDYLYQA YASDPQARLN LGIRRRLAPL LDNDRHRIEL 

       370        380        390        400        410        420 
MNLLLMTMPG SPIVYYGDEI GMGDNLLLGD RNGVRTPMQW DGGPNGGFSS APTERLFLPP 

       430        440        450        460        470        480 
ITDPVYGYGA VNVEAQQRNP SSLLNWTRRL IAMRKAHRAL GRGTLRFLRP GNRKVLAYLR 

       490        500        510        520        530        540 
EYEGETILCV ANVARAPQAV ELDLSPFKGH VPVELMGRSS FPPIGELPYL LTLGGYGCFV 

       550        560        570        580        590        600 
FRLATDVEAP AWHEERPVPP DLPVLVLVDA GWRTLFARTD EGVNQLMVRR AREQLERQII 

       610        620        630        640        650        660 
PRYFRTQPWF VYSEAALEKF EFGTLREWGT DSGTWLLATV TVTLLDGSIY HYALPLGLAW 

       670        680        690        700        710        720 
EDEDEGRVAA LLHVTLAKVR RLARVGILFD AFWDDGFCCA IVSAMERGET LAYGDGHLTF 

       730        740        750        760        770        780 
RTASAYPGFF CPLVTSSITR TVSEHGRLRV NLNDQLVLKS YPRQMQGTHP ELEMSRFLTE 

       790        800        810        820        830        840 
TAKFAHIPQL GGTVEYVASS GRHSTLAILE RYAPNQGDAW AYTLNYLERF LDLSRTTGEQ 

       850        860        870        880        890        900 
APDGRHGRYM GLMKTLGERT AEFHRALATP DRSGDFGSEP IAPPDILEWV NKVRHEMGVM 

       910        920        930        940        950        960 
YELLERALPA LPEPVAVAAQ QLFLVRPKLY RRVIRASRVR VDASKTRCHG NYHLGQVWLV 

       970        980        990       1000       1010       1020 
QNDFLIANYG GIPGRSWEER RAKHAPLRDV ASMLLSLSQA GAAALARVAG DSVDVMAALQ 

      1030       1040       1050       1060       1070       1080 
PHVDAWELAA RKAFYRGYRK GMDGHAAYPT DATAAEALLT LFLAEKAIAE LTEALERRAV 

      1090 
GSAAAMRRLV QVTRR 

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References

[1]"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25259 EMBL AAZ97125.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000116 Genomic DNA. Translation: AAZ97125.1.
RefSeqYP_314930.1. NC_007404.1.

3D structure databases

ProteinModelPortalQ3SJM9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292415.Tbd_1172.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ97125; AAZ97125; Tbd_1172.
GeneID3671533.
KEGGtbd:Tbd_1172.
PATRIC23968499. VBIThiDen82923_1158.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMARDGTNNE.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK2503718.

Enzyme and pathway databases

BioCycTDEN292415:GHWG-1200-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 1 hit.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3SJM9_THIDA
AccessionPrimary (citable) accession number: Q3SJM9
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 13, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)