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Q3SJ62 (Q3SJ62_THIDA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Tbd_1355
OrganismThiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP] EMBL AAZ97308.1
Taxonomic identifier292415 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus

Protein attributes

Sequence length1638 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q3SJ62 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 5E4E123F73316703

FASTA1,638174,658
        10         20         30         40         50         60 
MATITDVSPN RSNMSFGHDW QDVSGRMLSL ASSDDGKTVF AGSYSSGLWV SEDGGESWVQ 

        70         80         90        100        110        120 
LAWEQPAPDQ FGVPGALGGC CIPSVAIGPD IARWLDGRDQ RVLADLAGDG TADIVGFGST 

       130        140        150        160        170        180 
GVWTALGNGD GSFQPPRVVL AAFGTRAGGW QFDKHPRFLA DLSGDGRADI AGFGDAGVWT 

       190        200        210        220        230        240 
ALGNGDGTFQ PPQFVLADLG YESGWRVEKH PRFLVDLTGD GRADLVGFGD AGVWTALGNG 

       250        260        270        280        290        300 
DGTFQPPQFV LADLGYEAGW RVEKHPRFLA DVNGDGRADL VGFGDAGVWT ALGNGDGTFQ 

       310        320        330        340        350        360 
PPQFVLADLG YEAGWRVEKH PRFLADLNGD GRPDIVGFGD AGVWTALGNG DGSFQQPQFV 

       370        380        390        400        410        420 
LADLGYESGW RVDKHPRFLA DLTGDGRADL VAFGDAGVWT ALGNGDGSFQ PPQFVLADLG 

       430        440        450        460        470        480 
YESGWRVEQH PRFLVDLTGD GRADLVGFGD AGVYVAQSSG DGSFQQALRF VLPNFGSGLT 

       490        500        510        520        530        540 
VLALVRSDRE IEDAGIWRST DGGQTWSLVH AFPRSQGRPP AAGQLVWAQG TAHLVFAAGE 

       550        560        570        580        590        600 
NSLAFSRDGG ATWQTATTQT SPIIGTRSPV PANHVAVAAT PEGSLSPPVV YALASNMIQV 

       610        620        630        640        650        660 
SFDGGDSWTS DGGALPTPIG GPVGLANANN ECVMVVSPRS PFEVFVTRDA NAHPGLPQLW 

       670        680        690        700        710        720 
RGDFSQFAQT MASTWQNVPI PAVGGQDSGN VWLAITRPGQ GEALFYGTQR YFGDNLGEAS 

       730        740        750        760        770        780 
VAPLDPQSAS DWRELDTTGQ VHVDLHGLFL SPDFHAGFDG GGYAPTRGIV WLLSDGGIDR 

       790        800        810        820        830        840 
STDGGITFHP AGSISSLSTV NFAGTALPGK GPLLSLNTGD NDGFASRDGG KTWRPQRYGG 

       850        860        870        880        890        900 
GDNDTSWADP LRPHAMLIFT PRWGQTLALY ETEPGSLPDI SSTAHEHIIP GPPLRPGSRT 

       910        920        930        940        950        960 
WNATSGFALR GYRPLVHNLA SDDPSRPTDC VFIRFYGNFS RDDPFARYPD HLTVLMRARD 

       970        980        990       1000       1010       1020 
LHKITERTDW DTPGGWRVDR HPRLLTDLTA SGRADVVGFG DAGVWTALSK GGGLFADPRF 

      1030       1040       1050       1060       1070       1080 
VLADLGYDAG WRVEKHPRFL VDLTGDGRAD IVGFGDAGVW TALGNGDGTF QPPQFVLADL 

      1090       1100       1110       1120       1130       1140 
GYEAGWRVEK HPRFLVDLTG DGRADIVGFG DAGVWTALGN GDGTFQPPQF VLGDLGYDSG 

      1150       1160       1170       1180       1190       1200 
WRVERHPRFL VDLNGDGRAD IVGFGGAGVW TALGNGDGTF QPPQFVLADL GYESGWRVEK 

      1210       1220       1230       1240       1250       1260 
HPRFVVDLTG NGPTDLVGFG DAGVWTALGN GDGSFQPPQF VLADLGYDAG WRVDRHPRFL 

      1270       1280       1290       1300       1310       1320 
ADLDGDGRAD LVGFGDAGVW TALGNGDGSF QAPQLALEDF GYHQGWREEK HPRILADVTG 

      1330       1340       1350       1360       1370       1380 
EGRVDVVGFG DAGTLVAPAR ADGTFRERPL FVIPNFGSSE NGNAEQAGPF LPDPSIGVVQ 

      1390       1400       1410       1420       1430       1440 
ASGGHERTVF YIGGDMSKRL WKWTEGMTEW QPIIPGGGAA QAKRFFVSPY DPNLVYVIDR 

      1450       1460       1470       1480       1490       1500 
DRIKRSDDGG AVWQVDDSLE RMVTCDGRIP ADRDEVGDTT QVVLADMQFD PFNPGRRFAV 

      1510       1520       1530       1540       1550       1560 
GVAGAFMTDD GATWQRLLDT GAMRGLPTNC FFDWASDPSD PSVYVGFAGR GIVKISQLGL 

      1570       1580       1590       1600       1610       1620 
AGGVILRTAT SEADSEPAPF ERRVFRVRTP DGRVGTAETA PDGRLNVTLE DGRSVVHEAA 

      1630 
DVSLLDDDAP DADAPQRT 

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References

[1]"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25259.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000116 Genomic DNA. Translation: AAZ97308.1.
RefSeqYP_315113.1. NC_007404.1.

3D structure databases

ProteinModelPortalQ3SJ62.
ModBaseSearch...

Protein-protein interaction databases

STRING292415.Tbd_1355.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ97308; AAZ97308; Tbd_1355.
GeneID3672456.
KEGGtbd:Tbd_1355.
PATRIC23968849. VBIThiDen82923_1332.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3209.
OMAWTALGNG.

Family and domain databases

InterProIPR002860. BNR_rpt.
[Graphical view]
PfamPF02012. BNR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3SJ62_THIDA
AccessionPrimary (citable) accession number: Q3SJ62
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)