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Protein

Probable chemoreceptor glutamine deamidase CheD

Gene

cheD

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.UniRule annotation

Catalytic activityi

Protein L-glutamine + H2O = protein L-glutamate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Chemotaxis

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-1647-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable chemoreceptor glutamine deamidase CheDUniRule annotation (EC:3.5.1.44UniRule annotation)
Gene namesi
Name:cheDUniRule annotation
Ordered Locus Names:Tbd_1616
OrganismiThiobacillus denitrificans (strain ATCC 25259)
Taxonomic identifieri292415 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus
Proteomesi
  • UP000008291 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 202202Probable chemoreceptor glutamine deamidase CheDPRO_0000251073Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi292415.Tbd_1616.

Structurei

3D structure databases

ProteinModelPortaliQ3SIF9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CheD family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108Z4W. Bacteria.
COG1871. LUCA.
HOGENOMiHOG000273194.
KOiK03411.
OMAiVLDIYPR.
OrthoDBiPOG091H0ML3.

Family and domain databases

HAMAPiMF_01440. CheD. 1 hit.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3SIF9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSAIEEQLA TNLYYDRNFD CETAKILPGE YYFTAKPMLI VTVLGSCVAA
60 70 80 90 100
CIRDRVSGIG GMNHFMLPDG GGDPGNPLSA SMRYGAYAME VLINQLLKAG
110 120 130 140 150
ARRENLEAKV FGGGNVLRGF TTMNVGERNA QFVRDFLRAE NIRVVAEDLN
160 170 180 190 200
DVHPRKVYFF PRTGRVLVKK LKQLNNYTLV KREQDYASRL KSNVVAGEVD

LF
Length:202
Mass (Da):22,566
Last modified:October 11, 2005 - v1
Checksum:i40C10A60B276E287
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97569.1.
RefSeqiWP_011312128.1. NC_007404.1.

Genome annotation databases

EnsemblBacteriaiAAZ97569; AAZ97569; Tbd_1616.
KEGGitbd:Tbd_1616.
PATRICi23969393. VBIThiDen82923_1602.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97569.1.
RefSeqiWP_011312128.1. NC_007404.1.

3D structure databases

ProteinModelPortaliQ3SIF9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292415.Tbd_1616.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ97569; AAZ97569; Tbd_1616.
KEGGitbd:Tbd_1616.
PATRICi23969393. VBIThiDen82923_1602.

Phylogenomic databases

eggNOGiENOG4108Z4W. Bacteria.
COG1871. LUCA.
HOGENOMiHOG000273194.
KOiK03411.
OMAiVLDIYPR.
OrthoDBiPOG091H0ML3.

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-1647-MONOMER.

Family and domain databases

HAMAPiMF_01440. CheD. 1 hit.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCHED_THIDA
AccessioniPrimary (citable) accession number: Q3SIF9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.