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Q3SIF7 (Q3SIF7_THIDA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Tbd_1618 EMBL AAZ97571.1
OrganismThiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP] EMBL AAZ97571.1
Taxonomic identifier292415 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus

Protein attributes

Sequence length557 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q3SIF7 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: E44629FBDBA58445

FASTA55758,603
        10         20         30         40         50         60 
MRSNQPVTNV EYVLKDTETV VSKTDLRGNI TYVNQDFVDV SGFSEAELIG APQNIVRHPD 

        70         80         90        100        110        120 
MPEEAFADLW RTLQSGKVWS GLVKNRCKNG DYYWVDADVA PLIENGKTVG YASIRSKPDR 

       130        140        150        160        170        180 
EQVKEAERVY RAVKAGDKGL GIVEGKAIKC SSLDRCFARR APALKTLLAI ASSSMALIFV 

       190        200        210        220        230        240 
VMAVLAWLAT TETNGQFTGW LMGIAGLGVP LAALFAVLSY RSVVIPLDRV RADIERMSAG 

       250        260        270        280        290        300 
DLTGRIVAGG ADELVRLMQS LRVLQINMKL LIGQIKQSTD LVGNGAAEIA KGNADLSART 

       310        320        330        340        350        360 
ESQASSLEET ASSLEELTGT VKQNAEGTRH ASQLVTSTAQ IAANGGEVVG KVITTMGSIK 

       370        380        390        400        410        420 
ESSRKISDII GVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVATEVRN LAQRSAGAAK 

       430        440        450        460        470        480 
EIKTLINDSV AQVDAGRKLV DEAGDAMDDI VTSVQLVADI IAGTASASQE QSTGIEQVNQ 

       490        500        510        520        530        540 
AVAQMDELTQ QNAALVEQVA AASETLQDQA VKLAAIVDTF KLVSGRDAGR RPGAGRALAS 

       550 
GTNTALSGGA SGAMQAA 

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References

[1]"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25259 EMBL AAZ97571.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000116 Genomic DNA. Translation: AAZ97571.1.
RefSeqYP_315376.1. NC_007404.1.

3D structure databases

ProteinModelPortalQ3SIF7.
SMRQ3SIF7. Positions 299-522.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292415.Tbd_1618.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ97571; AAZ97571; Tbd_1618.
GeneID3673003.
KEGGtbd:Tbd_1618.
PATRIC23969397. VBIThiDen82923_1604.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000148074.
OMAEMVSSHE.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycTDEN292415:GHWG-1649-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3SIF7_THIDA
AccessionPrimary (citable) accession number: Q3SIF7
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 14, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)