Q3SIF7 (Q3SIF7_THIDA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chemotaxis sensory transducer EMBL AAZ97571.1

Gene names

Ordered Locus Names:

Tbd_1618

Organism

Thiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP] EMBL AAZ97571.1

Taxonomic identifier

292415 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Hydrogenophilales › Hydrogenophilaceae › Thiobacillus › Thiobacillus denitrificans

Protein attributes

Sequence length	557 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	chemotaxis Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3SIF7 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: E44629FBDBA58445	FASTA	557	58,603
	10 20 30 40 50 60 MRSNQPVTNV EYVLKDTETV VSKTDLRGNI TYVNQDFVDV SGFSEAELIG APQNIVRHPD 70 80 90 100 110 120 MPEEAFADLW RTLQSGKVWS GLVKNRCKNG DYYWVDADVA PLIENGKTVG YASIRSKPDR 130 140 150 160 170 180 EQVKEAERVY RAVKAGDKGL GIVEGKAIKC SSLDRCFARR APALKTLLAI ASSSMALIFV 190 200 210 220 230 240 VMAVLAWLAT TETNGQFTGW LMGIAGLGVP LAALFAVLSY RSVVIPLDRV RADIERMSAG 250 260 270 280 290 300 DLTGRIVAGG ADELVRLMQS LRVLQINMKL LIGQIKQSTD LVGNGAAEIA KGNADLSART 310 320 330 340 350 360 ESQASSLEET ASSLEELTGT VKQNAEGTRH ASQLVTSTAQ IAANGGEVVG KVITTMGSIK 370 380 390 400 410 420 ESSRKISDII GVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVATEVRN LAQRSAGAAK 430 440 450 460 470 480 EIKTLINDSV AQVDAGRKLV DEAGDAMDDI VTSVQLVADI IAGTASASQE QSTGIEQVNQ 490 500 510 520 530 540 AVAQMDELTQ QNAALVEQVA AASETLQDQA VKLAAIVDTF KLVSGRDAGR RPGAGRALAS 550 GTNTALSGGA SGAMQAA

References

[1]

"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans." Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P. J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25259.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000116 Genomic DNA. Translation: AAZ97571.1.
RefSeq	YP_315376.1. NC_007404.1.
3D structure databases
ProteinModelPortal	Q3SIF7.
SMR	Q3SIF7. Positions 299-522.
ModBase	Search...
Protein-protein interaction databases
STRING	292415.Tbd_1618.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAZ97571; AAZ97571; Tbd_1618.
GeneID	3673003.
KEGG	tbd:Tbd_1618.
PATRIC	23969397. VBIThiDen82923_1604.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2202.
HOGENOM	HOG000148074.
OMA	HNIVRHS.
Enzyme and pathway databases
BioCyc	TDEN292415:GHWG-1649-MONOMER.
Family and domain databases
InterPro	IPR004090. Chemotax_Me-accpt_rcpt. IPR003660. HAMP_linker_domain. IPR004089. MCPsignal_dom. IPR001610. PAC. IPR000014. PAS. IPR013655. PAS_fold_3. [Graphical view]
Pfam	PF00672. HAMP. 1 hit. PF00015. MCPsignal. 1 hit. PF08447. PAS_3. 1 hit. [Graphical view]
PRINTS	PR00260. CHEMTRNSDUCR.
SMART	SM00304. HAMP. 1 hit. SM00283. MA. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 1 hit. [Graphical view]
SUPFAM	SSF55785. SSF55785. 1 hit.
TIGRFAMs	TIGR00229. sensory_box. 1 hit.
PROSITE	PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. PS50885. HAMP. 1 hit. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3SIF7_THIDA

Accession

Primary (citable) accession number: Q3SIF7

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	May 29, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)