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Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Tbd_1618

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-1649-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Tbd_1618Imported
OrganismiThiobacillus denitrificans (strain ATCC 25259)Imported
Taxonomic identifieri292415 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus
ProteomesiUP000008291 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi292415.Tbd_1618.

Structurei

3D structure databases

ProteinModelPortaliQ3SIF7.
SMRiQ3SIF7. Positions 299-522.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000148074.
OMAiREWVDIA.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3SIF7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSNQPVTNV EYVLKDTETV VSKTDLRGNI TYVNQDFVDV SGFSEAELIG
60 70 80 90 100
APQNIVRHPD MPEEAFADLW RTLQSGKVWS GLVKNRCKNG DYYWVDADVA
110 120 130 140 150
PLIENGKTVG YASIRSKPDR EQVKEAERVY RAVKAGDKGL GIVEGKAIKC
160 170 180 190 200
SSLDRCFARR APALKTLLAI ASSSMALIFV VMAVLAWLAT TETNGQFTGW
210 220 230 240 250
LMGIAGLGVP LAALFAVLSY RSVVIPLDRV RADIERMSAG DLTGRIVAGG
260 270 280 290 300
ADELVRLMQS LRVLQINMKL LIGQIKQSTD LVGNGAAEIA KGNADLSART
310 320 330 340 350
ESQASSLEET ASSLEELTGT VKQNAEGTRH ASQLVTSTAQ IAANGGEVVG
360 370 380 390 400
KVITTMGSIK ESSRKISDII GVIDGIAFQT NILALNAAVE AARAGEQGRG
410 420 430 440 450
FAVVATEVRN LAQRSAGAAK EIKTLINDSV AQVDAGRKLV DEAGDAMDDI
460 470 480 490 500
VTSVQLVADI IAGTASASQE QSTGIEQVNQ AVAQMDELTQ QNAALVEQVA
510 520 530 540 550
AASETLQDQA VKLAAIVDTF KLVSGRDAGR RPGAGRALAS GTNTALSGGA

SGAMQAA
Length:557
Mass (Da):58,603
Last modified:October 11, 2005 - v1
Checksum:iE44629FBDBA58445
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97571.1.
RefSeqiWP_011312130.1. NC_007404.1.
YP_315376.1. NC_007404.1.

Genome annotation databases

EnsemblBacteriaiAAZ97571; AAZ97571; Tbd_1618.
KEGGitbd:Tbd_1618.
PATRICi23969397. VBIThiDen82923_1604.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97571.1.
RefSeqiWP_011312130.1. NC_007404.1.
YP_315376.1. NC_007404.1.

3D structure databases

ProteinModelPortaliQ3SIF7.
SMRiQ3SIF7. Positions 299-522.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292415.Tbd_1618.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ97571; AAZ97571; Tbd_1618.
KEGGitbd:Tbd_1618.
PATRICi23969397. VBIThiDen82923_1604.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000148074.
OMAiREWVDIA.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-1649-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
    Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
    J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25259Imported.

Entry informationi

Entry nameiQ3SIF7_THIDA
AccessioniPrimary (citable) accession number: Q3SIF7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 27, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.