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Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Tbd_1619

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. transmembrane signaling receptor activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-1650-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Tbd_1619Imported
OrganismiThiobacillus denitrificans (strain ATCC 25259)Imported
Taxonomic identifieri292415 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus
ProteomesiUP000008291: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 PotentialImportedAdd
BLAST
Chaini27 – 559533 PotentialImportedPRO_5000103466Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi292415.Tbd_1619.

Structurei

3D structure databases

ProteinModelPortaliQ3SIF6.
SMRiQ3SIF6. Positions 285-508.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
OMAiFIICITI.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q3SIF6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLKSKIVLS MGLVFLLFGV AISVALIGMQ GNKDRFDRFV EQDLALSRAV
60 70 80 90 100
TNLYAHGLQM GQALRNIVMD PSNQAAYKNL EDSAAGFKKT SDEALVLAAA
110 120 130 140 150
SPADLKVLQE VVAFREQQIP LQAKIVSLAA ADQAAAMTTI REEETPVWRN
160 170 180 190 200
IRVRLMDLNK AKNAAVEQTK AEVNAFSQRM LTITLVLVVL ALGVASVIVV
210 220 230 240 250
WLVRHIMKQL GGEPVYAVEM AQAISEGNFS RSITLDKGDN SSLLYAINGM
260 270 280 290 300
RENLTVTVGS IRQAADTIAV ASREIASGNA DLSSRTESQA SSLEETASSM
310 320 330 340 350
EELTSTVRQN AENARQANQL VVSTADVAVK GGEVVGQVVD TMASIKDSSR
360 370 380 390 400
KISDIIGVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV ASEVRNLAQR
410 420 430 440 450
SAGAAKEIKS LIEDSVGKVD AGSKLVDEAG KTMDEIVSSV KRVTDIMSEI
460 470 480 490 500
AAASQEQSAG IEQVNQAVGQ MDEMTQQNAA LVEEAAAAAE SLQEQAAKLA
510 520 530 540 550
DAVSVFRLDG AYAQRREVPV SAPRVAPLPT RPRPASVPAA RPKKLAAAQG

NDGGDWEEF
Length:559
Mass (Da):59,358
Last modified:October 11, 2005 - v1
Checksum:iDCC4F79098178449
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97572.1.
RefSeqiYP_315377.1. NC_007404.1.

Genome annotation databases

EnsemblBacteriaiAAZ97572; AAZ97572; Tbd_1619.
GeneIDi3673004.
KEGGitbd:Tbd_1619.
PATRICi23969399. VBIThiDen82923_1605.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97572.1.
RefSeqiYP_315377.1. NC_007404.1.

3D structure databases

ProteinModelPortaliQ3SIF6.
SMRiQ3SIF6. Positions 285-508.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292415.Tbd_1619.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ97572; AAZ97572; Tbd_1619.
GeneIDi3673004.
KEGGitbd:Tbd_1619.
PATRICi23969399. VBIThiDen82923_1605.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
OMAiFIICITI.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-1650-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
    Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
    J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25259Imported.

Entry informationi

Entry nameiQ3SIF6_THIDA
AccessioniPrimary (citable) accession number: Q3SIF6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 4, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.