Q3SIF6 (Q3SIF6_THIDA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chemotaxis sensory transducer EMBL AAZ97572.1

Gene names

Ordered Locus Names:

Tbd_1619

Organism

Thiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP] EMBL AAZ97572.1

Taxonomic identifier

292415 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Hydrogenophilales › Hydrogenophilaceae › Thiobacillus › Thiobacillus denitrificans

Protein attributes

Sequence length	559 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL AAZ97572.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	chemotaxis Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	transmembrane signaling receptor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 26	26	Potential EMBL AAZ97572.1
	Chain	27 – 559	533	Potential EMBL AAZ97572.1		PRO_5000103466

Sequences

	Sequence		Length	Mass (Da)
	Q3SIF6 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: DCC4F79098178449	FASTA	559	59,358
	10 20 30 40 50 60 MKLKSKIVLS MGLVFLLFGV AISVALIGMQ GNKDRFDRFV EQDLALSRAV TNLYAHGLQM 70 80 90 100 110 120 GQALRNIVMD PSNQAAYKNL EDSAAGFKKT SDEALVLAAA SPADLKVLQE VVAFREQQIP 130 140 150 160 170 180 LQAKIVSLAA ADQAAAMTTI REEETPVWRN IRVRLMDLNK AKNAAVEQTK AEVNAFSQRM 190 200 210 220 230 240 LTITLVLVVL ALGVASVIVV WLVRHIMKQL GGEPVYAVEM AQAISEGNFS RSITLDKGDN 250 260 270 280 290 300 SSLLYAINGM RENLTVTVGS IRQAADTIAV ASREIASGNA DLSSRTESQA SSLEETASSM 310 320 330 340 350 360 EELTSTVRQN AENARQANQL VVSTADVAVK GGEVVGQVVD TMASIKDSSR KISDIIGVID 370 380 390 400 410 420 GIAFQTNILA LNAAVEAARA GEQGRGFAVV ASEVRNLAQR SAGAAKEIKS LIEDSVGKVD 430 440 450 460 470 480 AGSKLVDEAG KTMDEIVSSV KRVTDIMSEI AAASQEQSAG IEQVNQAVGQ MDEMTQQNAA 490 500 510 520 530 540 LVEEAAAAAE SLQEQAAKLA DAVSVFRLDG AYAQRREVPV SAPRVAPLPT RPRPASVPAA 550 RPKKLAAAQG NDGGDWEEF

References

[1]

"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans." Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P. J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25259.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000116 Genomic DNA. Translation: AAZ97572.1.
RefSeq	YP_315377.1. NC_007404.1.
3D structure databases
ProteinModelPortal	Q3SIF6.
SMR	Q3SIF6. Positions 285-508.
ModBase	Search...
Protein-protein interaction databases
STRING	292415.Tbd_1619.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAZ97572; AAZ97572; Tbd_1619.
GeneID	3673004.
KEGG	tbd:Tbd_1619.
PATRIC	23969399. VBIThiDen82923_1605.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0840.
HOGENOM	HOG000148074.
OMA	INGMREN.
ProtClustDB	CLSK2770269.
Family and domain databases
InterPro	IPR004090. Chemotax_Me-accpt_rcpt. IPR003122. Chemotax_Me-accpt_rcpt_lig-bd. IPR004089. MCPsignal_dom. [Graphical view]
Pfam	PF00015. MCPsignal. 1 hit. PF02203. TarH. 1 hit. [Graphical view]
PRINTS	PR00260. CHEMTRNSDUCR.
SMART	SM00283. MA. 1 hit. [Graphical view]
PROSITE	PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3SIF6_THIDA

Accession

Primary (citable) accession number: Q3SIF6

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)