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Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Tbd_1620

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-1650-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Tbd_1620Imported
OrganismiThiobacillus denitrificans (strain ATCC 25259)Imported
Taxonomic identifieri292415 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus
Proteomesi
  • UP000008291 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei185 – 205HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi292415.Tbd_1620.

Structurei

3D structure databases

ProteinModelPortaliQ3SIF5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini207 – 259HAMPInterPro annotationAdd BLAST53
Domaini264 – 493Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili464 – 502Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiQINGAMR.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3SIF5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIGARLGLG FASVLLLLVV VAVIGVWRLQ TVGMMTDSLV KNEMHKARII
60 70 80 90 100
NEWESIINAN AVRALAAAKT NNPETEKFFV DASAAASKGG IALQKQLESL
110 120 130 140 150
LTDAESRALF AAIADKRSAY LAARDAALKE KAAGNVLGAK KFVDEDMKPR
160 170 180 190 200
LDAYLESLHD LARYQKQAID ATAGNIHRQY ESGRMLLIGL SIVALMMGIG
210 220 230 240 250
FAFWITRSIT RPMNQAVKVA QTVAAGDLTS RIEVEGKDET GRLLQALKDM
260 270 280 290 300
NDSLVKIVGQ VRLGTDAIAT ASSEIATGNL DLSSRTEEQA SSLEETASSM
310 320 330 340 350
EQLTSTVKQN ADHARQANQM AVSASEVAVK GGAVVAQVVD TMGSINESSR
360 370 380 390 400
KIVDIIAVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV ASEVRSLAQR
410 420 430 440 450
SAGAAKEIKT LIGDSVEKAD IGSKLVGQAG ATMDEIVASV KRVTDIMGEI
460 470 480 490 500
TAASQEQSAG IEQVNQAIAQ MDEVTQQNAA LVEEAAAAAS SMQDQAANLA
510 520 530 540 550
EAVSVFRLAG VNTQRPEQLT SNERIAALPA RTHTAAAPVV RTKKLAAIQG

SSGGEWEEF
Length:559
Mass (Da):58,996
Last modified:October 11, 2005 - v1
Checksum:iA98B863E7142D8E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97573.1.

Genome annotation databases

EnsemblBacteriaiAAZ97573; AAZ97573; Tbd_1620.
KEGGitbd:Tbd_1620.
PATRICi23969401. VBIThiDen82923_1606.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97573.1.

3D structure databases

ProteinModelPortaliQ3SIF5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292415.Tbd_1620.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ97573; AAZ97573; Tbd_1620.
KEGGitbd:Tbd_1620.
PATRICi23969401. VBIThiDen82923_1606.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiQINGAMR.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-1650-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3SIF5_THIDA
AccessioniPrimary (citable) accession number: Q3SIF5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 2, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.