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Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Tbd_1620

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Tbd_1620Imported
OrganismiThiobacillus denitrificans (strain ATCC 25259)Imported
Taxonomic identifieri292415 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesThiobacillaceaeThiobacillus
Proteomesi
  • UP000008291 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei185 – 205HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi292415.Tbd_1620

Structurei

3D structure databases

ProteinModelPortaliQ3SIF5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini207 – 259HAMPInterPro annotationAdd BLAST53
Domaini264 – 493Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili283 – 303Sequence analysisAdd BLAST21
Coiled coili464 – 502Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q Bacteria
COG0840 LUCA
HOGENOMiHOG000148074
KOiK03406
OMAiAVNAMDE
OrthoDBiPOG091H0QRR

Family and domain databases

CDDicd06225 HAMP, 1 hit
InterProiView protein in InterPro
IPR004090 Chemotax_Me-accpt_rcpt
IPR003660 HAMP_dom
IPR024478 HlyB_4HB_MCP
IPR004089 MCPsignal_dom
PfamiView protein in Pfam
PF12729 4HB_MCP_1, 1 hit
PF00672 HAMP, 1 hit
PF00015 MCPsignal, 1 hit
PRINTSiPR00260 CHEMTRNSDUCR
SMARTiView protein in SMART
SM00304 HAMP, 1 hit
SM00283 MA, 1 hit
PROSITEiView protein in PROSITE
PS50111 CHEMOTAXIS_TRANSDUC_2, 1 hit
PS50885 HAMP, 1 hit

Sequencei

Sequence statusi: Complete.

Q3SIF5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIGARLGLG FASVLLLLVV VAVIGVWRLQ TVGMMTDSLV KNEMHKARII
60 70 80 90 100
NEWESIINAN AVRALAAAKT NNPETEKFFV DASAAASKGG IALQKQLESL
110 120 130 140 150
LTDAESRALF AAIADKRSAY LAARDAALKE KAAGNVLGAK KFVDEDMKPR
160 170 180 190 200
LDAYLESLHD LARYQKQAID ATAGNIHRQY ESGRMLLIGL SIVALMMGIG
210 220 230 240 250
FAFWITRSIT RPMNQAVKVA QTVAAGDLTS RIEVEGKDET GRLLQALKDM
260 270 280 290 300
NDSLVKIVGQ VRLGTDAIAT ASSEIATGNL DLSSRTEEQA SSLEETASSM
310 320 330 340 350
EQLTSTVKQN ADHARQANQM AVSASEVAVK GGAVVAQVVD TMGSINESSR
360 370 380 390 400
KIVDIIAVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV ASEVRSLAQR
410 420 430 440 450
SAGAAKEIKT LIGDSVEKAD IGSKLVGQAG ATMDEIVASV KRVTDIMGEI
460 470 480 490 500
TAASQEQSAG IEQVNQAIAQ MDEVTQQNAA LVEEAAAAAS SMQDQAANLA
510 520 530 540 550
EAVSVFRLAG VNTQRPEQLT SNERIAALPA RTHTAAAPVV RTKKLAAIQG

SSGGEWEEF
Length:559
Mass (Da):58,996
Last modified:October 11, 2005 - v1
Checksum:iA98B863E7142D8E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA Translation: AAZ97573.1

Genome annotation databases

EnsemblBacteriaiAAZ97573; AAZ97573; Tbd_1620
KEGGitbd:Tbd_1620

Similar proteinsi

Entry informationi

Entry nameiQ3SIF5_THIDA
AccessioniPrimary (citable) accession number: Q3SIF5
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: June 20, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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