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Q3SIF5

- Q3SIF5_THIDA

UniProt

Q3SIF5 - Q3SIF5_THIDA

Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Tbd_1620

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. signal transducer activity Source: InterPro

    GO - Biological processi

    1. chemotaxis Source: InterPro

    Enzyme and pathway databases

    BioCyciTDEN292415:GHWG-1651-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Chemotaxis sensory transducerImported
    Gene namesi
    Ordered Locus Names:Tbd_1620Imported
    OrganismiThiobacillus denitrificans (strain ATCC 25259)Imported
    Taxonomic identifieri292415 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus
    ProteomesiUP000008291: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2323 PotentialImportedAdd
    BLAST
    Chaini24 – 559536 PotentialImportedPRO_5000103467Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi292415.Tbd_1620.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3SIF5.
    SMRiQ3SIF5. Positions 285-508.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0840.
    HOGENOMiHOG000148074.
    KOiK03406.
    OMAiYESTRDN.
    OrthoDBiEOG6G4VQG.

    Family and domain databases

    InterProiIPR024478. 4HB_MCP.
    IPR004090. Chemotax_Me-accpt_rcpt.
    IPR003660. HAMP_linker_domain.
    IPR004089. MCPsignal_dom.
    [Graphical view]
    PfamiPF12729. 4HB_MCP_1. 1 hit.
    PF00672. HAMP. 1 hit.
    PF00015. MCPsignal. 1 hit.
    [Graphical view]
    PRINTSiPR00260. CHEMTRNSDUCR.
    SMARTiSM00304. HAMP. 1 hit.
    SM00283. MA. 1 hit.
    [Graphical view]
    PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    PS50885. HAMP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q3SIF5-1 [UniParc]FASTAAdd to Basket

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    MKIGARLGLG FASVLLLLVV VAVIGVWRLQ TVGMMTDSLV KNEMHKARII    50
    NEWESIINAN AVRALAAAKT NNPETEKFFV DASAAASKGG IALQKQLESL 100
    LTDAESRALF AAIADKRSAY LAARDAALKE KAAGNVLGAK KFVDEDMKPR 150
    LDAYLESLHD LARYQKQAID ATAGNIHRQY ESGRMLLIGL SIVALMMGIG 200
    FAFWITRSIT RPMNQAVKVA QTVAAGDLTS RIEVEGKDET GRLLQALKDM 250
    NDSLVKIVGQ VRLGTDAIAT ASSEIATGNL DLSSRTEEQA SSLEETASSM 300
    EQLTSTVKQN ADHARQANQM AVSASEVAVK GGAVVAQVVD TMGSINESSR 350
    KIVDIIAVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV ASEVRSLAQR 400
    SAGAAKEIKT LIGDSVEKAD IGSKLVGQAG ATMDEIVASV KRVTDIMGEI 450
    TAASQEQSAG IEQVNQAIAQ MDEVTQQNAA LVEEAAAAAS SMQDQAANLA 500
    EAVSVFRLAG VNTQRPEQLT SNERIAALPA RTHTAAAPVV RTKKLAAIQG 550
    SSGGEWEEF 559
    Length:559
    Mass (Da):58,996
    Last modified:October 11, 2005 - v1
    Checksum:iA98B863E7142D8E3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000116 Genomic DNA. Translation: AAZ97573.1.
    RefSeqiYP_315378.1. NC_007404.1.

    Genome annotation databases

    EnsemblBacteriaiAAZ97573; AAZ97573; Tbd_1620.
    GeneIDi3673005.
    KEGGitbd:Tbd_1620.
    PATRICi23969401. VBIThiDen82923_1606.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000116 Genomic DNA. Translation: AAZ97573.1 .
    RefSeqi YP_315378.1. NC_007404.1.

    3D structure databases

    ProteinModelPortali Q3SIF5.
    SMRi Q3SIF5. Positions 285-508.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 292415.Tbd_1620.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ97573 ; AAZ97573 ; Tbd_1620 .
    GeneIDi 3673005.
    KEGGi tbd:Tbd_1620.
    PATRICi 23969401. VBIThiDen82923_1606.

    Phylogenomic databases

    eggNOGi COG0840.
    HOGENOMi HOG000148074.
    KOi K03406.
    OMAi YESTRDN.
    OrthoDBi EOG6G4VQG.

    Enzyme and pathway databases

    BioCyci TDEN292415:GHWG-1651-MONOMER.

    Family and domain databases

    InterProi IPR024478. 4HB_MCP.
    IPR004090. Chemotax_Me-accpt_rcpt.
    IPR003660. HAMP_linker_domain.
    IPR004089. MCPsignal_dom.
    [Graphical view ]
    Pfami PF12729. 4HB_MCP_1. 1 hit.
    PF00672. HAMP. 1 hit.
    PF00015. MCPsignal. 1 hit.
    [Graphical view ]
    PRINTSi PR00260. CHEMTRNSDUCR.
    SMARTi SM00304. HAMP. 1 hit.
    SM00283. MA. 1 hit.
    [Graphical view ]
    PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    PS50885. HAMP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
      Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
      J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 25259Imported.

    Entry informationi

    Entry nameiQ3SIF5_THIDA
    AccessioniPrimary (citable) accession number: Q3SIF5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3