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Q3SIF3

- Q3SIF3_THIDA

UniProt

Q3SIF3 - Q3SIF3_THIDA

Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Tbd_1622

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. transmembrane signaling receptor activity Source: InterPro

    GO - Biological processi

    1. chemotaxis Source: InterPro

    Enzyme and pathway databases

    BioCyciTDEN292415:GHWG-1653-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Chemotaxis sensory transducerImported
    Gene namesi
    Ordered Locus Names:Tbd_1622Imported
    OrganismiThiobacillus denitrificans (strain ATCC 25259)Imported
    Taxonomic identifieri292415 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus
    ProteomesiUP000008291: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3737 PotentialImportedAdd
    BLAST
    Chaini38 – 572535 PotentialImportedPRO_5000103469Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi292415.Tbd_1622.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3SIF3.
    SMRiQ3SIF3. Positions 298-521.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0840.
    HOGENOMiHOG000148074.
    KOiK05874.
    OMAiFARIRML.
    OrthoDBiEOG6G4VQG.

    Family and domain databases

    InterProiIPR004090. Chemotax_Me-accpt_rcpt.
    IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
    IPR003660. HAMP_linker_domain.
    IPR004089. MCPsignal_dom.
    [Graphical view]
    PfamiPF00672. HAMP. 1 hit.
    PF00015. MCPsignal. 1 hit.
    PF02203. TarH. 1 hit.
    [Graphical view]
    PRINTSiPR00260. CHEMTRNSDUCR.
    SMARTiSM00304. HAMP. 1 hit.
    SM00283. MA. 1 hit.
    [Graphical view]
    PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    PS50885. HAMP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q3SIF3-1 [UniParc]FASTAAdd to Basket

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    MEMLANLSIK SRLVFVIGFL SILLTAIGGL GLVSLSATNG SLKTVYEDRV    50
    VGLGHLERIN ALMNGSQIIV GEAVAGQLSA FPDDSAVVDQ RVNDIKNTIT 100
    EIDGIWKTFL ASHLSSEEKA LADAFSASRQ KYGREGVVPV LAALSAHDFQ 150
    QAGEILQGPM RETYPAVRAN AEALIASQLK LAQSEFAAAQ SRFVMVRNIS 200
    VFAIVAGVLL AGLTGVWLVR AITRPLNQAV RIAESVAAGD LTQKIEVQSQ 250
    DETGQLMQAL KDMNVSLADI VGQVRHGTDT IAVASREIAS GNADLSSRTE 300
    SQASSLEETA SSMEELTSTV RQNAENARQA NQLVVSTADV AVKGGEVVGQ 350
    VVDTMASIKD SSRKISDIIG VIDGIAFQTN ILALNAAVEA ARAGEQGRGF 400
    AVVASEVRNL AQRSAGAAKE IKSLIEDSVG KVDAGSKLVD EAGKTMDEIV 450
    SSVKRVTDIM SEIAAASQEQ SAGIEQVNQA VGQMDEMTQQ NAALVEEAAA 500
    AAESLQEQAA KLADAVSVFR LDGAYAQRRE VPVSAPRVAP LPTRPRPASV 550
    PAARPKKLAA AQGNDGGDWE EF 572
    Length:572
    Mass (Da):60,167
    Last modified:October 11, 2005 - v1
    Checksum:i2FA13CC8F90FFDD0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000116 Genomic DNA. Translation: AAZ97575.1.
    RefSeqiYP_315380.1. NC_007404.1.

    Genome annotation databases

    EnsemblBacteriaiAAZ97575; AAZ97575; Tbd_1622.
    GeneIDi3673007.
    KEGGitbd:Tbd_1622.
    PATRICi23969405. VBIThiDen82923_1608.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000116 Genomic DNA. Translation: AAZ97575.1 .
    RefSeqi YP_315380.1. NC_007404.1.

    3D structure databases

    ProteinModelPortali Q3SIF3.
    SMRi Q3SIF3. Positions 298-521.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 292415.Tbd_1622.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ97575 ; AAZ97575 ; Tbd_1622 .
    GeneIDi 3673007.
    KEGGi tbd:Tbd_1622.
    PATRICi 23969405. VBIThiDen82923_1608.

    Phylogenomic databases

    eggNOGi COG0840.
    HOGENOMi HOG000148074.
    KOi K05874.
    OMAi FARIRML.
    OrthoDBi EOG6G4VQG.

    Enzyme and pathway databases

    BioCyci TDEN292415:GHWG-1653-MONOMER.

    Family and domain databases

    InterProi IPR004090. Chemotax_Me-accpt_rcpt.
    IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
    IPR003660. HAMP_linker_domain.
    IPR004089. MCPsignal_dom.
    [Graphical view ]
    Pfami PF00672. HAMP. 1 hit.
    PF00015. MCPsignal. 1 hit.
    PF02203. TarH. 1 hit.
    [Graphical view ]
    PRINTSi PR00260. CHEMTRNSDUCR.
    SMARTi SM00304. HAMP. 1 hit.
    SM00283. MA. 1 hit.
    [Graphical view ]
    PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    PS50885. HAMP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
      Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
      J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 25259Imported.

    Entry informationi

    Entry nameiQ3SIF3_THIDA
    AccessioniPrimary (citable) accession number: Q3SIF3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3