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Q3SIF3

- Q3SIF3_THIDA

UniProt

Q3SIF3 - Q3SIF3_THIDA

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Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Tbd_1622

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. transmembrane signaling receptor activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-1653-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Tbd_1622Imported
OrganismiThiobacillus denitrificans (strain ATCC 25259)Imported
Taxonomic identifieri292415 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus
ProteomesiUP000008291: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3737 PotentialImportedAdd
BLAST
Chaini38 – 572535 PotentialImportedPRO_5000103469Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi292415.Tbd_1622.

Structurei

3D structure databases

ProteinModelPortaliQ3SIF3.
SMRiQ3SIF3. Positions 298-521.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK05874.
OMAiFARIRML.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q3SIF3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MEMLANLSIK SRLVFVIGFL SILLTAIGGL GLVSLSATNG SLKTVYEDRV
60 70 80 90 100
VGLGHLERIN ALMNGSQIIV GEAVAGQLSA FPDDSAVVDQ RVNDIKNTIT
110 120 130 140 150
EIDGIWKTFL ASHLSSEEKA LADAFSASRQ KYGREGVVPV LAALSAHDFQ
160 170 180 190 200
QAGEILQGPM RETYPAVRAN AEALIASQLK LAQSEFAAAQ SRFVMVRNIS
210 220 230 240 250
VFAIVAGVLL AGLTGVWLVR AITRPLNQAV RIAESVAAGD LTQKIEVQSQ
260 270 280 290 300
DETGQLMQAL KDMNVSLADI VGQVRHGTDT IAVASREIAS GNADLSSRTE
310 320 330 340 350
SQASSLEETA SSMEELTSTV RQNAENARQA NQLVVSTADV AVKGGEVVGQ
360 370 380 390 400
VVDTMASIKD SSRKISDIIG VIDGIAFQTN ILALNAAVEA ARAGEQGRGF
410 420 430 440 450
AVVASEVRNL AQRSAGAAKE IKSLIEDSVG KVDAGSKLVD EAGKTMDEIV
460 470 480 490 500
SSVKRVTDIM SEIAAASQEQ SAGIEQVNQA VGQMDEMTQQ NAALVEEAAA
510 520 530 540 550
AAESLQEQAA KLADAVSVFR LDGAYAQRRE VPVSAPRVAP LPTRPRPASV
560 570
PAARPKKLAA AQGNDGGDWE EF
Length:572
Mass (Da):60,167
Last modified:October 11, 2005 - v1
Checksum:i2FA13CC8F90FFDD0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97575.1.
RefSeqiYP_315380.1. NC_007404.1.

Genome annotation databases

EnsemblBacteriaiAAZ97575; AAZ97575; Tbd_1622.
GeneIDi3673007.
KEGGitbd:Tbd_1622.
PATRICi23969405. VBIThiDen82923_1608.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ97575.1 .
RefSeqi YP_315380.1. NC_007404.1.

3D structure databases

ProteinModelPortali Q3SIF3.
SMRi Q3SIF3. Positions 298-521.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 292415.Tbd_1622.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAZ97575 ; AAZ97575 ; Tbd_1622 .
GeneIDi 3673007.
KEGGi tbd:Tbd_1622.
PATRICi 23969405. VBIThiDen82923_1608.

Phylogenomic databases

eggNOGi COG0840.
HOGENOMi HOG000148074.
KOi K05874.
OMAi FARIRML.
OrthoDBi EOG6G4VQG.

Enzyme and pathway databases

BioCyci TDEN292415:GHWG-1653-MONOMER.

Family and domain databases

InterProi IPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view ]
Pfami PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view ]
PRINTSi PR00260. CHEMTRNSDUCR.
SMARTi SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view ]
PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
    Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
    J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25259Imported.

Entry informationi

Entry nameiQ3SIF3_THIDA
AccessioniPrimary (citable) accession number: Q3SIF3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: October 29, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3