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Q3SIF3 (Q3SIF3_THIDA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Tbd_1622 EMBL AAZ97575.1
OrganismThiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP] EMBL AAZ97575.1
Taxonomic identifier292415 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus

Protein attributes

Sequence length572 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AAZ97575.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3737 Potential EMBL AAZ97575.1
Chain38 – 572535 Potential EMBL AAZ97575.1
PRO_5000103469

Sequences

Sequence LengthMass (Da)Tools
Q3SIF3 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 2FA13CC8F90FFDD0

FASTA57260,167
        10         20         30         40         50         60 
MEMLANLSIK SRLVFVIGFL SILLTAIGGL GLVSLSATNG SLKTVYEDRV VGLGHLERIN 

        70         80         90        100        110        120 
ALMNGSQIIV GEAVAGQLSA FPDDSAVVDQ RVNDIKNTIT EIDGIWKTFL ASHLSSEEKA 

       130        140        150        160        170        180 
LADAFSASRQ KYGREGVVPV LAALSAHDFQ QAGEILQGPM RETYPAVRAN AEALIASQLK 

       190        200        210        220        230        240 
LAQSEFAAAQ SRFVMVRNIS VFAIVAGVLL AGLTGVWLVR AITRPLNQAV RIAESVAAGD 

       250        260        270        280        290        300 
LTQKIEVQSQ DETGQLMQAL KDMNVSLADI VGQVRHGTDT IAVASREIAS GNADLSSRTE 

       310        320        330        340        350        360 
SQASSLEETA SSMEELTSTV RQNAENARQA NQLVVSTADV AVKGGEVVGQ VVDTMASIKD 

       370        380        390        400        410        420 
SSRKISDIIG VIDGIAFQTN ILALNAAVEA ARAGEQGRGF AVVASEVRNL AQRSAGAAKE 

       430        440        450        460        470        480 
IKSLIEDSVG KVDAGSKLVD EAGKTMDEIV SSVKRVTDIM SEIAAASQEQ SAGIEQVNQA 

       490        500        510        520        530        540 
VGQMDEMTQQ NAALVEEAAA AAESLQEQAA KLADAVSVFR LDGAYAQRRE VPVSAPRVAP 

       550        560        570 
LPTRPRPASV PAARPKKLAA AQGNDGGDWE EF 

« Hide

References

[1]"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25259 EMBL AAZ97575.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000116 Genomic DNA. Translation: AAZ97575.1.
RefSeqYP_315380.1. NC_007404.1.

3D structure databases

ProteinModelPortalQ3SIF3.
SMRQ3SIF3. Positions 298-521.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292415.Tbd_1622.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ97575; AAZ97575; Tbd_1622.
GeneID3673007.
KEGGtbd:Tbd_1622.
PATRIC23969405. VBIThiDen82923_1608.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK05874.
OMAPKMDAIE.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK939888.

Enzyme and pathway databases

BioCycTDEN292415:GHWG-1653-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3SIF3_THIDA
AccessionPrimary (citable) accession number: Q3SIF3
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: February 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)