Q3SHF6 (Q3SHF6_THIDA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Formyltetrahydrofolate deformylase EMBL AAZ97930.1

Gene names

Ordered Locus Names:

Tbd_1977

Organism

Thiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP] EMBL AAZ97930.1

Taxonomic identifier

292415 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Hydrogenophilales › Hydrogenophilaceae › Thiobacillus

Protein attributes

Sequence length	284 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	'de novo' IMP biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	amino acid binding Inferred from electronic annotation. Source: InterPro formyltetrahydrofolate deformylase activity Inferred from electronic annotation. Source: InterPro hydroxymethyl-, formyl- and related transferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3SHF6 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 602AE1CAFD08BCE3	FASTA	284	32,858
	10 20 30 40 50 60 MRHTAVLLIS CPDQRGLVAA IADFLLAHRA NILHADQHQD AELKLFLMRV EWDLAGFNLD 70 80 90 100 110 120 LRDFATAFQP IAERFGMTWR LAESSRKPRM AVFVSKFDHC LADLLYRYQS GELHCELPII 130 140 150 160 170 180 LSNHEDTRWL ADAYRVPYQH MAVTKESKHE TEQIQLAILR DQKIDFIVLA RYMQVLSGDF 190 200 210 220 230 240 IRHFPNRIIN IHHSFLPAFH GAKPYHRAFE RGVKLIGATA HYVTETLDDG PIIEQDVARI 250 260 270 280 SHRDHIDDLI HKGADLEKVV LSRAVKWHLD NRVLVYANKT VVFD

References

[1]

"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans." Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P. J. Bacteriol. 188:1473-1488(2006) [PubMed: 16452431] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000116 Genomic DNA. Translation: AAZ97930.1.
RefSeq	YP_315735.1. NC_007404.1.
3D structure databases
ProteinModelPortal	Q3SHF6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3SHF6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3671729.
GenomeReviews	Gene locus Tbd_1977 in contig CP000116_GR.
KEGG	tbd:Tbd_1977.
NMPDR	fig|292415.3.peg.2075.
PATRIC	23970127. VBIThiDen82923_1957.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0788.
HOGENOM	HBG286016.
OMA	RIAIWVS.
PhylomeDB	Q3SHF6.
ProtClustDB	CLSK588629.
Enzyme and pathway databases
BioCyc	TDEN292415:TBD_1977-MONOMER.
Family and domain databases
InterPro	IPR002912. ACT-bd. IPR002376. Formyl_transf_N. IPR004810. PurU. [Graphical view]
Gene3D	G3DSA:3.40.50.170. Formyl_transf_N. 1 hit.
KO	K01433.
PANTHER	PTHR10520:SF7. PTHR10520:SF7. 1 hit.
Pfam	PF01842. ACT. 1 hit. PF00551. Formyl_trans_N. 1 hit. [Graphical view]
PIRSF	PIRSF036480. FormyFH4_hydr. 1 hit.
PRINTS	PR01575. FFH4HYDRLASE.
SUPFAM	SSF53328. formyl_transf. 1 hit.
TIGRFAMs	TIGR00655. PurU. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3SHF6_THIDA

Accession

Primary (citable) accession number: Q3SHF6

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)