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Q3SH79 (GLGA_THIDA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Tbd_2057
OrganismThiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP]
Taxonomic identifier292415 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus

Protein attributes

Sequence length493 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Sequence caution

The sequence AAZ98010.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 493493Glycogen synthase HAMAP-Rule MF_00484
PRO_0000230269

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q3SH79 [UniParc].

Last modified April 4, 2006. Version 2.
Checksum: 066D5448E75CEADA

FASTA49354,401
        10         20         30         40         50         60 
MKVLFVASEA FPLVKTGGLG DVLHGLPQAL HGLGVGVRLL LPGYRTLLRQ LDQVRIVAWF 

        70         80         90        100        110        120 
DVRGAEGPVA ARVLETRHPG FDFPLWIVDC PPLFDRPGNP YVDVTGYDWP DNAERFAVFA 

       130        140        150        160        170        180 
RVAALLAQDA HEAGWLPDVV HTHDWQTGLV PAFLADLPAR PRTVFTIHNL AYGGHFPHGD 

       190        200        210        220        230        240 
FLRLQLPAHW WSHEGVEFHG GFSMLKAGIV YADAVTTVSP TYAEEICTPA FGYGLDGLLR 

       250        260        270        280        290        300 
SRRHKLHGIL NGIDSATWDP ADDPHLRARY TAGRILPGKR RDKQALLERF LPAADEAALQ 

       310        320        330        340        350        360 
APLVGLVGRL VEQKGIDWVL AAMPLLLAET DARFVLLGSG QAAYEQRLTR LARQHPTRVF 

       370        380        390        400        410        420 
VEIGYDEALA HQIEAGADMF LMPSRFEPCG LNQMYSLRYG TLPIVFKTGG LADTIVDTNE 

       430        440        450        460        470        480 
ASLADGSANG FVFDTPDVAH FVDAVRRALA LYRQPSLWRR VQQTGMRLSF DWRESAGHYL 

       490 
ALYAADSAGE PDV 

« Hide

References

[1]"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans."
Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P.
J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25259.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000116 Genomic DNA. Translation: AAZ98010.1. Different initiation.
RefSeqYP_315815.1. NC_007404.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292415.Tbd_2057.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ98010; AAZ98010; Tbd_2057.
GeneID3672228.
KEGGtbd:Tbd_2057.
PATRIC23970289. VBIThiDen82923_2035.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycTDEN292415:GHWG-2103-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_THIDA
AccessionPrimary (citable) accession number: Q3SH79
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: February 19, 2014
This is version 51 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways