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Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Tbd_2406

Organism
Thiobacillus denitrificans (strain ATCC 25259)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-2455-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Tbd_2406Imported
OrganismiThiobacillus denitrificans (strain ATCC 25259)Imported
Taxonomic identifieri292415 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaHydrogenophilalesHydrogenophilaceaeThiobacillus
Proteomesi
  • UP000008291 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei169 – 189HelicalSequence analysisAdd BLAST21
Transmembranei204 – 226HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi292415.Tbd_2406.

Structurei

3D structure databases

ProteinModelPortaliQ3SG91.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 60PAS (PER-ARNT-SIM)InterPro annotationAdd BLAST36
Domaini228 – 280HAMPInterPro annotationAdd BLAST53
Domaini285 – 514Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili485 – 523Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03776.
OMAiMQTKYDS.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3SG91-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVNLPVTNH AYELSEGDTL VSKTDREGVI VYANPAFVEA SGYTEAELIG
60 70 80 90 100
QPHNLVRHPD MPPEAFADLW STLQAGLPWT GLVKNRRKNG DFYWVQANVT
110 120 130 140 150
PVREDGVLSG FLSVRTRPTR EQIAEAEQLY RQLREGSPKR LEIRRGVVSR
160 170 180 190 200
GGLVGRLLAF RRIPVNTRIL LSTAIGATLM LAGGVFGWYE TSALARAAGV
210 220 230 240 250
DSVIPTVVAA AGAVGAVLTL LFGYFISRTI LRPLDRALGV ARAIAGGDLS
260 270 280 290 300
HRFEVTAWEE TGQLMLALQQ MTANMVAVLS DIGSNVGSIR VATGEIAAGN
310 320 330 340 350
ADLAGRTESQ ASNLEQTAAS MEELTGTVKQ NAEHARHANQ LADAATDIAV
360 370 380 390 400
KGGGVVNQVV DTMTSIKASS ARISDIISVI DGIAFQTNIL ALNAAVEAAR
410 420 430 440 450
AGEQGRGFAV VATEVRHLAQ RSTLAAREIK DLIGDSVEKV EQGAKLVDQA
460 470 480 490 500
GEAMDDIVTS VELVAGIVGG IATASQEQHA GIEQVNEAVG QMDEITQQNA
510 520 530 540 550
ALVEEAAAAA QSLHEQADRL AQAVGVFSLG RGRARSQPAG TRPAPRLMPA
560
ASPQKRRGTA ARAIGR
Length:566
Mass (Da):59,857
Last modified:October 11, 2005 - v1
Checksum:i7A03334ECC16CB83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ98359.1.
RefSeqiWP_011312918.1. NC_007404.1.

Genome annotation databases

EnsemblBacteriaiAAZ98359; AAZ98359; Tbd_2406.
KEGGitbd:Tbd_2406.
PATRICi23971005. VBIThiDen82923_2389.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000116 Genomic DNA. Translation: AAZ98359.1.
RefSeqiWP_011312918.1. NC_007404.1.

3D structure databases

ProteinModelPortaliQ3SG91.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292415.Tbd_2406.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ98359; AAZ98359; Tbd_2406.
KEGGitbd:Tbd_2406.
PATRICi23971005. VBIThiDen82923_2389.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03776.
OMAiMQTKYDS.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciTDEN292415:GHWG-2455-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3SG91_THIDA
AccessioniPrimary (citable) accession number: Q3SG91
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 2, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.