Q3SG68 (Q3SG68_THIDA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exodeoxyribonuclease III xth EMBL AAZ98388.1

Gene names

Ordered Locus Names:

Tbd_2435

Organism

Thiobacillus denitrificans (strain ATCC 25259) [Complete proteome] [HAMAP] EMBL AAZ98388.1

Taxonomic identifier

292415 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Hydrogenophilales › Hydrogenophilaceae › Thiobacillus › Thiobacillus denitrificans

Protein attributes

Sequence length	255 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro nucleic acid phosphodiester bond hydrolysis Inferred from electronic annotation. Source: GOC
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro endonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3SG68 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: 5C7338F772DC8E18	FASTA	255	28,809
	10 20 30 40 50 60 MKIAAWNVNS LKVRLPQLLD FLATRRPDVV CLQETKVPDD AFPSVELSAA GYRAVFSGQK 70 80 90 100 110 120 TYNGVAILSR SQATDVSVGI PGFGDEQKRV IAATVEGTRV VCVYCPNGQS PDSDKYFYKL 130 140 150 160 170 180 AWFDALSLWL MEELARHPRL AVLGDFNIAP EDRDVHDPKA WEGSVHVSPR ERERFQALLQ 190 200 210 220 230 240 LGLKDSFRLF EQPEKSFSWW DYRMMGFRRN HGLRIDHILL TDALAASCTS STIDRDMRKL 250 ERPSDHAPVL AEIGV

References

[1]

"The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans." Beller H.R., Chain P.S., Letain T.E., Chakicherla A., Larimer F.W., Richardson P.M., Coleman M.A., Wood A.P., Kelly D.P. J. Bacteriol. 188:1473-1488(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25259.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000116 Genomic DNA. Translation: AAZ98388.1.
RefSeq	YP_316193.1. NC_007404.1.
3D structure databases
ProteinModelPortal	Q3SG68.
SMR	Q3SG68. Positions 1-254.
ModBase	Search...
Protein-protein interaction databases
STRING	292415.Tbd_2435.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAZ98388; AAZ98388; Tbd_2435.
GeneID	3673945.
KEGG	tbd:Tbd_2435.
PATRIC	23971065. VBIThiDen82923_2419.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0708.
HOGENOM	HOG000034587.
KO	K01142.
OMA	EKAFSWW.
Family and domain databases
InterPro	IPR020847. AP_endonuclease_F1_BS. IPR005135. Endo/exonuclease/phosphatase. IPR004808. ExoDNase_III. [Graphical view]
PANTHER	PTHR22748. PTHR22748. 1 hit.
Pfam	PF03372. Exo_endo_phos. 1 hit. [Graphical view]
SUPFAM	SSF56219. Exo_endo_phos. 1 hit.
TIGRFAMs	TIGR00633. xth. 1 hit.
PROSITE	PS00726. AP_NUCLEASE_F1_1. 1 hit. PS51435. AP_NUCLEASE_F1_4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3SG68_THIDA

Accession

Primary (citable) accession number: Q3SG68

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)