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Protein
Submitted name:

ZNF578 protein

Gene

ZNF578

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. nucleic acid binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
ZNF578 proteinImported
Gene namesi
Name:ZNF578Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG018163.

Family and domain databases

Gene3Di3.30.160.60. 12 hits.
InterProiIPR000742. EG-like_dom.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00181. EGF. 1 hit.
SM00355. ZnF_C2H2. 12 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 10 hits.
PS50157. ZINC_FINGER_C2H2_2. 12 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q3MI94-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SCRPETHTPN NYGNNFFHSS LLTQKQEVHM REKSFQCNET GKAFNCSSFV
60 70 80 90 100
RKHQIIHLGE KQYKFDICGK VFNEKRYLAR HRRCHTSEKP YKCNECGKSF
110 120 130 140 150
SYKSSLTCHR RCHTGEKPYK CNECGKSFSY KSSLTCHHRC HTGEKPYKCN
160 170 180 190 200
ECGKSFSYKS SLRCHRRLHT GIKPYKCNEC GKMFGQNSTL VIHKAIHTGE
210 220 230 240 250
KPYKCNECGK AFNQQSHLSR HHRLHTGEKP YKCNDCGKAF IHQSSLARHH
260 270 280 290 300
RLHTGEKSYK CEECDRVFSQ KSNLERHKII HTGEKPYKCN ECHKTFSHRS
310 320 330 340 350
SLPCHRRLHS GEKPYKCNEC GKTFNVQSHL SRHHRLHTGE KPYKCKVCDK
360 370 380 390
AFMCHSYLAN HTRIHSGEKP YKCNECGKAH NHLIDSSIKP CMSS
Length:394
Mass (Da):45,922
Last modified:December 16, 2008 - v3
Checksum:i8C3950407711EFEA
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC103904 mRNA. Translation: AAI03905.3.
BC115704 mRNA. Translation: AAI15705.1.
RefSeqiNP_001093164.1. NM_001099694.1.
UniGeneiHs.157287.

Genome annotation databases

GeneIDi147660.
KEGGihsa:147660.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC103904 mRNA. Translation: AAI03905.3.
BC115704 mRNA. Translation: AAI15705.1.
RefSeqiNP_001093164.1. NM_001099694.1.
UniGeneiHs.157287.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi147660.
KEGGihsa:147660.

Organism-specific databases

CTDi147660.

Phylogenomic databases

HOVERGENiHBG018163.

Miscellaneous databases

ChiTaRSiZNF578. human.
GenomeRNAii147660.
NextBioi85659.

Family and domain databases

Gene3Di3.30.160.60. 12 hits.
InterProiIPR000742. EG-like_dom.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00181. EGF. 1 hit.
SM00355. ZnF_C2H2. 12 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 10 hits.
PS50157. ZINC_FINGER_C2H2_2. 12 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiQ3MI94_HUMAN
AccessioniPrimary (citable) accession number: Q3MI94
Secondary accession number(s): Q1LZM9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: December 16, 2008
Last modified: April 29, 2015
This is version 68 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.