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Q3MI94

- Q3MI94_HUMAN

UniProt

Q3MI94 - Q3MI94_HUMAN

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Protein
Submitted name:

ZNF578 protein

Gene

ZNF578

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. nucleic acid binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
ZNF578 proteinImported
Gene namesi
Name:ZNF578Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG018163.

Family and domain databases

Gene3Di3.30.160.60. 12 hits.
InterProiIPR000742. EG-like_dom.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00181. EGF. 1 hit.
SM00355. ZnF_C2H2. 12 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 10 hits.
PS50157. ZINC_FINGER_C2H2_2. 12 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q3MI94-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
SCRPETHTPN NYGNNFFHSS LLTQKQEVHM REKSFQCNET GKAFNCSSFV
60 70 80 90 100
RKHQIIHLGE KQYKFDICGK VFNEKRYLAR HRRCHTSEKP YKCNECGKSF
110 120 130 140 150
SYKSSLTCHR RCHTGEKPYK CNECGKSFSY KSSLTCHHRC HTGEKPYKCN
160 170 180 190 200
ECGKSFSYKS SLRCHRRLHT GIKPYKCNEC GKMFGQNSTL VIHKAIHTGE
210 220 230 240 250
KPYKCNECGK AFNQQSHLSR HHRLHTGEKP YKCNDCGKAF IHQSSLARHH
260 270 280 290 300
RLHTGEKSYK CEECDRVFSQ KSNLERHKII HTGEKPYKCN ECHKTFSHRS
310 320 330 340 350
SLPCHRRLHS GEKPYKCNEC GKTFNVQSHL SRHHRLHTGE KPYKCKVCDK
360 370 380 390
AFMCHSYLAN HTRIHSGEKP YKCNECGKAH NHLIDSSIKP CMSS
Length:394
Mass (Da):45,922
Last modified:December 16, 2008 - v3
Checksum:i8C3950407711EFEA
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC103904 mRNA. Translation: AAI03905.3.
BC115704 mRNA. Translation: AAI15705.1.
RefSeqiNP_001093164.1. NM_001099694.1.
UniGeneiHs.157287.

Genome annotation databases

GeneIDi147660.
KEGGihsa:147660.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC103904 mRNA. Translation: AAI03905.3 .
BC115704 mRNA. Translation: AAI15705.1 .
RefSeqi NP_001093164.1. NM_001099694.1.
UniGenei Hs.157287.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 147660.
KEGGi hsa:147660.

Organism-specific databases

CTDi 147660.

Phylogenomic databases

HOVERGENi HBG018163.

Miscellaneous databases

ChiTaRSi ZNF578. human.
GenomeRNAii 147660.
NextBioi 85659.

Family and domain databases

Gene3Di 3.30.160.60. 12 hits.
InterProi IPR000742. EG-like_dom.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
SMARTi SM00181. EGF. 1 hit.
SM00355. ZnF_C2H2. 12 hits.
[Graphical view ]
PROSITEi PS00028. ZINC_FINGER_C2H2_1. 10 hits.
PS50157. ZINC_FINGER_C2H2_2. 12 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiQ3MI94_HUMAN
AccessioniPrimary (citable) accession number: Q3MI94
Secondary accession number(s): Q1LZM9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: December 16, 2008
Last modified: November 26, 2014
This is version 66 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.