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Q3MI94 (Q3MI94_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ZNF578 protein EMBL AAI03905.3
Gene names
Name:ZNF578 EMBL AAI03905.3
OrganismHomo sapiens (Human) EMBL AAI03905.3
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length394 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Cellular_componentintracellular

Inferred from electronic annotation. Source: InterPro

   Molecular_functionnucleic acid binding

Inferred from electronic annotation. Source: InterPro

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAI03905.3

Sequences

Sequence LengthMass (Da)Tools
Q3MI94 [UniParc].

Last modified December 16, 2008. Version 3.
Checksum: 8C3950407711EFEA

FASTA39445,922
        10         20         30         40         50         60 
SCRPETHTPN NYGNNFFHSS LLTQKQEVHM REKSFQCNET GKAFNCSSFV RKHQIIHLGE 

        70         80         90        100        110        120 
KQYKFDICGK VFNEKRYLAR HRRCHTSEKP YKCNECGKSF SYKSSLTCHR RCHTGEKPYK 

       130        140        150        160        170        180 
CNECGKSFSY KSSLTCHHRC HTGEKPYKCN ECGKSFSYKS SLRCHRRLHT GIKPYKCNEC 

       190        200        210        220        230        240 
GKMFGQNSTL VIHKAIHTGE KPYKCNECGK AFNQQSHLSR HHRLHTGEKP YKCNDCGKAF 

       250        260        270        280        290        300 
IHQSSLARHH RLHTGEKSYK CEECDRVFSQ KSNLERHKII HTGEKPYKCN ECHKTFSHRS 

       310        320        330        340        350        360 
SLPCHRRLHS GEKPYKCNEC GKTFNVQSHL SRHHRLHTGE KPYKCKVCDK AFMCHSYLAN 

       370        380        390 
HTRIHSGEKP YKCNECGKAH NHLIDSSIKP CMSS

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: PCR rescued clones EMBL AAI03905.3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC103904 mRNA. Translation: AAI03905.3.
BC115704 mRNA. Translation: AAI15705.1.
IPIIPI00644095.
RefSeqNP_001093164.1. NM_001099694.1.
UniGeneHs.157287.

3D structure databases

ProteinModelPortalQ3MI94.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID147660.
KEGGhsa:147660.

Organism-specific databases

CTD147660.

Phylogenomic databases

HOVERGENHBG018163.

Family and domain databases

Gene3D3.30.160.60. 12 hits.
InterProIPR000742. EG-like_dom.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTSM00181. EGF. 1 hit.
SM00355. ZnF_C2H2. 12 hits.
[Graphical view]
PROSITEPS00028. ZINC_FINGER_C2H2_1. 10 hits.
PS50157. ZINC_FINGER_C2H2_2. 12 hits.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi147660.
NextBio85659.

Entry information

Entry nameQ3MI94_HUMAN
AccessionPrimary (citable) accession number: Q3MI94
Secondary accession number(s): Q1LZM9
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: December 16, 2008
Last modified: March 6, 2013
This is version 56 of the entry and version 3 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
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