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Protein
Submitted name:

GDP-mannose 4, 6-dehydratase

Gene

Gmds

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-6787639. GDP-fucose biosynthesis.

Names & Taxonomyi

Protein namesi
Submitted name:
GDP-mannose 4, 6-dehydrataseImported
Submitted name:
RCG44147Imported
Gene namesi
Name:GmdsImported
ORF Names:rCG_44147Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 17

Organism-specific databases

RGDi1311008. Gmds.

Subcellular locationi

GO - Cellular componenti

Expressioni

Gene expression databases

BgeeiENSRNOG00000017605.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000023691.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 358NAD(P)-bd_domInterPro annotationAdd BLAST332

Phylogenomic databases

eggNOGiKOG1372. Eukaryota.
COG1089. LUCA.
GeneTreeiENSGT00440000033640.
HOGENOMiHOG000168003.
HOVERGENiHBG000727.
KOiK01711.
OMAiTDCLYLG.
OrthoDBiEOG091G093Z.
TreeFamiTF300682.

Family and domain databases

HAMAPiMF_00955. GDP_Man_dehydratase. 1 hit.
InterProiView protein in InterPro
IPR006368. GDP_Man_deHydtase.
IPR016040. NAD(P)-bd_dom.
PfamiView protein in Pfam
PF16363. GDP_Man_Dehyd. 1 hit.
SUPFAMiSSF51735. SSF51735. 1 hit.
TIGRFAMsiTIGR01472. gmd. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3MHS7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHAPASCRR YPGSGDGEMG KLRKVALITG ITGQDGSYLA EFLLEKGYEV
60 70 80 90 100
HGIVRRSSSF NTGRIEHLYK NPQAHIEGNM KLHYGDLTDS TCLVKIINEV
110 120 130 140 150
KPTEIYNLGA QSHVKISFDL AEYTADVDGV GTLRLLDAIK TCGLINSVKF
160 170 180 190 200
YQASTSELYG KVQEIPQKET TPFYPRSPYG AAKLYAYWIV VNFREAYNLF
210 220 230 240 250
AVNGILFNHE SPRRGANFVT RKISRSVAKI YLGQLECFSL GNLDAKRDWG
260 270 280 290 300
HAKDYVEAMW LMLQNDEPED FVIATGEVHS VREFVEKSFM HIGKTIVWEG
310 320 330 340 350
KNENEVGRCK ETGKIHVTVD LKYYRPTEVD FLQGDCSKAQ QKLNWKPRVA
360 370
FDELVREMVQ ADVELMRTNP NA
Length:372
Mass (Da):42,095
Last modified:October 25, 2005 - v1
Checksum:i7C03643BBA45307D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07027481 Genomic DNA. No translation available.
AABR07027482 Genomic DNA. No translation available.
AABR07027483 Genomic DNA. No translation available.
AABR07027484 Genomic DNA. No translation available.
AABR07027485 Genomic DNA. No translation available.
AABR07027486 Genomic DNA. No translation available.
BC104708 mRNA. Translation: AAI04709.1.
CH473977 Genomic DNA. Translation: EDL98349.1.
RefSeqiNP_001034695.1. NM_001039606.1.
UniGeneiRn.212995.

Genome annotation databases

EnsembliENSRNOT00000023691; ENSRNOP00000023691; ENSRNOG00000017605.
GeneIDi291095.
KEGGirno:291095.
UCSCiRGD:1311008. rat.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ3MHS7_RAT
AccessioniPrimary (citable) accession number: Q3MHS7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: October 25, 2005
Last modified: June 7, 2017
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported