Q3MGD1 (RL9_ANAVT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L9

Gene names

Name:	rplI
Synonyms:	rpl9
Ordered Locus Names:	Ava_0329

Organism

Anabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]

Taxonomic identifier

240292 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length	152 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_00503
Sequence similarities	Belongs to the ribosomal protein L9P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 152	152	50S ribosomal protein L9 HAMAP MF_00503		PRO_0000236469

Sequences

	Sequence		Length	Mass (Da)
	Q3MGD1 [UniParc]. Last modified October 25, 2005. Version 1. Checksum: 2F26579ACC66E710	FASTA	152	16,753
	10 20 30 40 50 60 MVKRVQLVLT KDVSKLGRSG DLVDVAPGYA RNYLIPQSLA THATPGILKQ VERRREQERQ 70 80 90 100 110 120 RQLELRQQAL EQKEALEKVG SLKIAKQVGE NEAIFGTVTS QDVADAIQAA TSQEVDRRGI 130 140 150 TIPDIGKLGT YKAEIKLFSD VTAQIDIEVV AS

References

[1]

"Complete sequence of Anabaena variabilis ATCC 29413." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29413 / PCC 7937.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000117 Genomic DNA. Translation: ABA19955.1.
RefSeq	YP_320850.1. NC_007413.1.
3D structure databases
ProteinModelPortal	Q3MGD1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3MGD1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3682762.
GenomeReviews	Gene locus Ava_0329 in contig CP000117_GR.
KEGG	ava:Ava_0329.
NMPDR	fig|240292.3.peg.844.
PATRIC	35420967. VBIAnaVar43351_1057.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0359.
HOGENOM	HBG586587.
OMA	ITVPDIH.
PhylomeDB	Q3MGD1.
ProtClustDB	PRK00137.
Enzyme and pathway databases
BioCyc	AVAR240292:AVA_0329-MONOMER.
Family and domain databases
HAMAP	MF_00503. Ribosomal_L9. [Tree]
InterPro	IPR000244. Ribosomal_L9. IPR009027. Ribosomal_L9/RNase_H1_N. IPR020594. Ribosomal_L9_bac/chp. IPR020069. Ribosomal_L9_C. IPR020070. Ribosomal_L9_N. [Graphical view]
Gene3D	G3DSA:3.10.430.100. Ribosomal_L9. 1 hit. G3DSA:3.40.5.10. Ribosomal_L9. 1 hit.
KO	K02939.
PANTHER	PTHR21368. Ribosomal_L9. 1 hit.
Pfam	PF03948. Ribosomal_L9_C. 1 hit. PF01281. Ribosomal_L9_N. 1 hit. [Graphical view]
SUPFAM	SSF55658. L9_N_like. 1 hit. SSF55653. Ribosomal_L9. 1 hit.
TIGRFAMs	TIGR00158. L9. 1 hit.
PROSITE	PS00651. RIBOSOMAL_L9. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL9_ANAVT

Accession

Primary (citable) accession number: Q3MGD1

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2006
Last sequence update:	October 25, 2005
Last modified:	January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program