Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase

Gene

Ava_0679

Organism
Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciAVAR240292:GCY3-682-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesteraseImported
Gene namesi
Ordered Locus Names:Ava_0679Imported
OrganismiAnabaena variabilis (strain ATCC 29413 / PCC 7937)Imported
Taxonomic identifieri240292 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeAnabaena
ProteomesiUP000002533: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi240292.Ava_0679.

Structurei

3D structure databases

ProteinModelPortaliQ3MFD3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2199.
HOGENOMiHOG000136246.
OMAiGHTAGDW.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3MFD3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQLNQKLYLY STLDNFRLLN KNYTAKIMLV AFLGTHIPLL TLLFSFVISN
60 70 80 90 100
SYSWEMTIRV LVIALFATLI GTVVTLYALH HLLIPVNLTS ATLRDYLNNK
110 120 130 140 150
TLPNLPTEFV DEAGTLMADT SQTLHKLDEL IDYISNYDKL TGLPNRELLR
160 170 180 190 200
ERVNQALSQQ YSQKMVAVMV LGIDDFTGIS HALEHEQSNL LLRAVGQRLT
210 220 230 240 250
SCLAQKDILA HLSGDEFAIA RVEIPSIESI VKLSQLLLSA LNKPFTIKGD
260 270 280 290 300
QIHITASIGI TINQPDNLHD VDQLLQQAHV ALYQAKQQGR SQHQFYSPEI
310 320 330 340 350
NAQLQERLAL ENELHGALQR NEIVVYYQPI IDLQTQQITA VEALVRWQHP
360 370 380 390 400
TRGLVSPAKF IPIAEANGLI VEIGEWVLRT ACLQNRAWQL AGLPPIRMSV
410 420 430 440 450
NLSARQFEES NLVELVGEII QESGLHPSYL ELEVTESSLM ADIQRSVTIL
460 470 480 490 500
KQLRELGVWL ALDDFGTGYS SLNYLKRFPV NMLKIDRSFV QDVCSNPDSA
510 520 530 540 550
AVTNAIIALA KSLQLKITAE GIETQQQLSY LQKRGCQEGQ GYYFGIPAPA
560 570
NEITEILQPE EAKEAMLYDR PGVIAV
Length:576
Mass (Da):64,577
Last modified:October 25, 2005 - v1
Checksum:i6BEC484AA1CB2131
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA20303.1.
RefSeqiWP_011317550.1. NC_007413.1.
YP_321198.1. NC_007413.1.

Genome annotation databases

EnsemblBacteriaiABA20303; ABA20303; Ava_0679.
GeneIDi3678825.
KEGGiava:Ava_0679.
PATRICi35421756. VBIAnaVar43351_1449.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA20303.1.
RefSeqiWP_011317550.1. NC_007413.1.
YP_321198.1. NC_007413.1.

3D structure databases

ProteinModelPortaliQ3MFD3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi240292.Ava_0679.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA20303; ABA20303; Ava_0679.
GeneIDi3678825.
KEGGiava:Ava_0679.
PATRICi35421756. VBIAnaVar43351_1449.

Phylogenomic databases

eggNOGiCOG2199.
HOGENOMiHOG000136246.
OMAiGHTAGDW.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciAVAR240292:GCY3-682-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Anabaena variabilis ATCC 29413."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29413 / PCC 7937Imported.

Entry informationi

Entry nameiQ3MFD3_ANAVT
AccessioniPrimary (citable) accession number: Q3MFD3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: October 25, 2005
Last modified: January 7, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.