Q3MF96 (RL17_ANAVT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L17

Gene names

Name:	rplQ
Synonyms:	rpl17
Ordered Locus Names:	Ava_0716

Organism

Anabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]

Taxonomic identifier

240292 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length	116 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L32 By similarity.
Sequence similarities	Belongs to the ribosomal protein L17P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 116	116	50S ribosomal protein L17 HAMAP MF_01368		PRO_0000267818

Sequences

	Sequence		Length	Mass (Da)
	Q3MF96 [UniParc]. Last modified October 25, 2005. Version 1. Checksum: 5D7192D557E5A066	FASTA	116	13,272
	10 20 30 40 50 60 MRHRNRVKKL GKPADQRRAL LRALTTELIR HGRITTTLVR AKVVRSEVDK IITLAKDGSL 70 80 90 100 110 AARRRALGYI YDKQLVHALF EQVSSRYGNR QGGYTRILHT VPRRGDNAEM AIIELV

References

[1]

"Complete sequence of Anabaena variabilis ATCC 29413." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29413 / PCC 7937.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000117 Genomic DNA. Translation: ABA20340.1.
RefSeq	YP_321235.1. NC_007413.1.
3D structure databases
HSSP	HSSP built from PDB template 2CQM based on UniProtKB Q9NRX2.
ProteinModelPortal	Q3MF96.
SMR	Q3MF96. Positions 1-116.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3MF96.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3679371.
GenomeReviews	Gene locus Ava_0716 in contig CP000117_GR.
KEGG	ava:Ava_0716.
PATRIC	35421834. VBIAnaVar43351_1488.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0203.
HOGENOM	HBG704211.
OMA	FSELGPR.
PhylomeDB	Q3MF96.
ProtClustDB	PRK05591.
Enzyme and pathway databases
BioCyc	AVAR240292:AVA_0716-MONOMER.
Family and domain databases
HAMAP	MF_01368. Ribosomal_L17. [Tree]
InterPro	IPR000456. Ribosomal_L17. [Graphical view]
Gene3D	G3DSA:3.90.1030.10. Ribosomal_L17. 1 hit.
KO	K02879.
PANTHER	PTHR14413. Ribosomal_L17. 1 hit.
Pfam	PF01196. Ribosomal_L17. 1 hit. [Graphical view]
SUPFAM	SSF64263. Ribosomal_L17. 1 hit.
TIGRFAMs	TIGR00059. L17. 1 hit.
PROSITE	PS01167. RIBOSOMAL_L17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL17_ANAVT

Accession

Primary (citable) accession number: Q3MF96

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 12, 2006
Last sequence update:	October 25, 2005
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program