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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with GAF sensor

Gene

Ava_0828

Organism
Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciAVAR240292:GCY3-838-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with GAF sensorImported
Gene namesi
Ordered Locus Names:Ava_0828Imported
OrganismiAnabaena variabilis (strain ATCC 29413 / PCC 7937)Imported
Taxonomic identifieri240292 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeAnabaena
ProteomesiUP000002533 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi240292.Ava_0828.

Structurei

3D structure databases

ProteinModelPortaliQ3MEY4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000057930.
OMAiCIEELNW.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR016132. Phyto_chromo_attachment.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50046. PHYTOCHROME_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3MEY4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKKSPRAKA CSCHNITCCP AKEAGKLFLW FPIPHTLKKV TDYLQKLAIK
60 70 80 90 100
FELMGERPGL GLGCRAGQAQ EIAHSVAQIL TSRELKETQV LFIRGAIQPQ
110 120 130 140 150
LQDFSDISSL QRFVKFSQSD WLVEMLAQER FTSHFQPIVS MKNTSEIYGY
160 170 180 190 200
EALLRGLDEQ GNLIPPQPIV ELATEAGLLP QLDRIARLST IAQFSSHQVS
210 220 230 240 250
GQIFINFAPT AVYDPASCLK STVEAIDQAG ISHERVVFEV VESDSPQDLD
260 270 280 290 300
HLKAVLKYYR DAGFSIALDD LGSGYSSLNL LHQLRPDFIK LDMELIRDVH
310 320 330 340 350
QDLYKASITE KLLEIAQKLN IRTVAEGIEC IEELNWVQER GATFAQGYLI
360 370 380 390 400
AKPDIVPVTT TPHFDTNTST LVLHCSKQVE QFVQHQSESE RIVAAVTQRI
410 420 430 440 450
RQSLKLEEIL QTTADEVRQL FEVDRVLIYR FEPDWSGLVA VESLTEGSMS
460 470 480 490 500
ILGFHILDTC FQSTHAAYYQ QGNTRAMEDI ENAGLSPCHL QLLQSLQIRA
510 520 530 540 550
NLIVPILQKE RLWGLLIAHQ CTSTRQWQQS EINLFNQLAS QAAIAIQQSE
560 570 580 590 600
LYLQLQQANL ELQRLACSDG LTQVANRRCF DNTIALVWEH LAREQGSLSL
610 620 630 640 650
ILCDVDCFKL YNDTLGHLAG DDVLRHVAGA ISRSVKGPSD LVARYGGEEF
660 670 680 690 700
AVILPNTDAE GAIAVAKEIQ SNVSILQLPH PSSQVSELIS LSLGLATTIP
710 720 730
DSQSSPAILI AAADQGLYQA KAQGRNCLVQ VERI
Length:734
Mass (Da):81,606
Last modified:October 25, 2005 - v1
Checksum:iDBA30DEF15079091
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA20452.1.
RefSeqiWP_011317683.1. NC_007413.1.
YP_321347.1. NC_007413.1.

Genome annotation databases

EnsemblBacteriaiABA20452; ABA20452; Ava_0828.
KEGGiava:Ava_0828.
PATRICi35422088. VBIAnaVar43351_1609.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA20452.1.
RefSeqiWP_011317683.1. NC_007413.1.
YP_321347.1. NC_007413.1.

3D structure databases

ProteinModelPortaliQ3MEY4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi240292.Ava_0828.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA20452; ABA20452; Ava_0828.
KEGGiava:Ava_0828.
PATRICi35422088. VBIAnaVar43351_1609.

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000057930.
OMAiCIEELNW.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciAVAR240292:GCY3-838-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR016132. Phyto_chromo_attachment.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50046. PHYTOCHROME_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Anabaena variabilis ATCC 29413."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29413 / PCC 7937Imported.

Entry informationi

Entry nameiQ3MEY4_ANAVT
AccessioniPrimary (citable) accession number: Q3MEY4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: October 25, 2005
Last modified: April 29, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.