Q3MDS2 (Q3MDS2_ANAVT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Peptidyl-prolyl cis-trans isomerase, cyclophilin type EMBL ABA20864.1
EC=5.2.1.8 EMBL ABA20864.1

Gene names

Ordered Locus Names:

Ava_1240

Organism

Anabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]

Taxonomic identifier

240292 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length	262 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides By similarity. RuleBase RU004223
Sequence similarities	Belongs to the cyclophilin-type PPIase family. RuleBase RU004223 Contains 1 PPIase cyclophilin-type domain. RuleBase RU003420

Ontologies

Keywords
Domain	Signal EMBL ABA20864.1
Molecular function	Isomerase Rotamase RuleBase RU003420
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein folding Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	peptidyl-prolyl cis-trans isomerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 26	26	Potential EMBL ABA20864.1
	Chain	27 – 262	236	Potential EMBL ABA20864.1		PRO_5000103905

Sequences

	Sequence		Length	Mass (Da)
	Q3MDS2 [UniParc]. Last modified October 25, 2005. Version 1. Checksum: 6728E9AA2ABD9AD3	FASTA	262	27,917
	10 20 30 40 50 60 MRLKFSQFLV AFLIIGSLIL GGCSAQEVSL NSSPGSTAVE TTTTTAEATS VSETNSESNS 70 80 90 100 110 120 GMTNSLPRLE GKATVVITVK GSPITVEVDG TNAPITAGNF IDLVQKGVYD NTVFHRVVRQ 130 140 150 160 170 180 PQPFVVQGGD PQSKDPKSSQ QLWGTGGYID PKTGTERRIP LEIKPKGEAE PLYGKTFESA 190 200 210 220 230 240 RVMVAPELQH KQGAVAMARS QQPDSASSQF YFALADLGFL DGNYAVFGQV TQGFDVVNKI 250 260 QQGDRIDSAK VTQGAENLKA AQ

References

[1]

"Complete sequence of Anabaena variabilis ATCC 29413." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29413 / PCC 7937.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000117 Genomic DNA. Translation: ABA20864.1.
RefSeq	YP_321759.1. NC_007413.1.
3D structure databases
ProteinModelPortal	Q3MDS2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3MDS2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3683178.
GenomeReviews	Gene locus Ava_1240 in contig CP000117_GR.
KEGG	ava:Ava_1240.
NMPDR	fig|240292.3.peg.1924.
PATRIC	35423015. VBIAnaVar43351_2069.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0652.
HOGENOM	HBG610621.
OMA	QPFVVQG.
PhylomeDB	Q3MDS2.
ProtClustDB	CLSK769364.
Family and domain databases
InterPro	IPR002130. Cyclophilin-like_PPIase_dom. [Graphical view]
Gene3D	G3DSA:2.40.100.10. PPIase_cyclophilin. 1 hit.
KO	K03768.
Pfam	PF00160. Pro_isomerase. 1 hit. [Graphical view]
PRINTS	PR00153. CSAPPISMRASE.
SUPFAM	SSF50891. CSA_PPIase. 1 hit.
PROSITE	PS50072. CSA_PPIASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3MDS2_ANAVT

Accession

Primary (citable) accession number: Q3MDS2

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2005
Last sequence update:	October 25, 2005
Last modified:	January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)