Q3MD84 (Q3MD84_ANAVT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, starch-binding protein EMBL ABA21052.1
EC=2.4.1.19 EMBL ABA21052.1

Gene names

Ordered Locus Names:

Ava_1429

Organism

Anabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]

Taxonomic identifier

240292 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length	642 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
Molecular function	Glycosyltransferase EMBL ABA21052.1 Hydrolase EMBL ABA21052.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro cyclomaltodextrin glucanotransferase activity Inferred from electronic annotation. Source: EC hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3MD84 [UniParc]. Last modified October 25, 2005. Version 1. Checksum: 60677B9EA348EB33	FASTA	642	74,135
	10 20 30 40 50 60 MVQTPPSQFS EEQYKVENAN AEVQALIESP TPDTEIDLEF LYTRDIEFRQ ETIYFLVVDR 70 80 90 100 110 120 FYDGDAENSE GYNPELYDPN GKDWGKYWGG DLQGVIDKLD YLKDMGVTAL WLTPLFEQVE 130 140 150 160 170 180 ELFVGNAAMH GYWTKDFKRL NPRYIGNGED PSLNNTQETR NTTFDRLIAE LHKRKMKLIL 190 200 210 220 230 240 DIVCNHSSPD TSGSKGELYD DGVKIADFND DVNHWYHHYG EVQNWEDDWQ VQNCELAGLA 250 260 270 280 290 300 TFNENNTEYR NYIKSAIKQW LDRGVDALRV DTVKHMPIWF WQEFTGDMYN HKPDVFIFGE 310 320 330 340 350 360 WIYNYPSDDR SVEFANNSGM TLLDFGLCVA IRGALAQGAE GGFHLIQEIF DQDDRYNGAT 370 380 390 400 410 420 ELITFVDNHD MPRFQSLNPD PAMLKVAIAL IMTSRGIPCI YYGTEQYLHD DTNGGNDPYN 430 440 450 460 470 480 RPMMENWDTD TEVYRYLRLL SGIRRLNPAV SMGSQWQKYL TPDVYCYVRR YRSSVCFVAL 490 500 510 520 530 540 NRGGEVTLPE VQTDLPDGEH TCAVTRNKFE VKDGKIYNLQ LEERGVIVLS HVGERVKAQT 550 560 570 580 590 600 IIRVQLNGVH TQPGETIVVV GDCPELGNWD ISKAYPLEYI NSNTWFAEIP FDESAGKLIS 610 620 630 640 YKYAMWREGR SPLRENTLNR RWVVAKEGTV KWRDTWASGR ES

References

[1]

"Complete sequence of Anabaena variabilis ATCC 29413." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29413 / PCC 7937.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000117 Genomic DNA. Translation: ABA21052.1.
RefSeq	YP_321947.1. NC_007413.1.
3D structure databases
ProteinModelPortal	Q3MD84.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3MD84.
Protein family/group databases
CAZy	CBM20. Carbohydrate-Binding Module Family 20. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3682568.
GenomeReviews	Gene locus Ava_1429 in contig CP000117_GR.
KEGG	ava:Ava_1429.
NMPDR	fig|240292.3.peg.3337.
PATRIC	35423443. VBIAnaVar43351_2283.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HBG441882.
OMA	FHIFGEV.
PhylomeDB	Q3MD84.
ProtClustDB	CLSK435339.
Family and domain databases
InterPro	IPR006048. A-amylase_b_C. IPR015902. Alpha_amylase. IPR013784. Carb-bd-like_fold. IPR002044. CBM_fam20. IPR006046. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K00701.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02806. Alpha-amylase_C. 1 hit. PF00686. CBM_20. 1 hit. [Graphical view]
PRINTS	PR00110. ALPHAAMYLASE.
SMART	SM00642. Aamy. 1 hit. SM01065. CBM_2. 1 hit. [Graphical view]
SUPFAM	SSF49452. CBD_4. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS51166. CBM20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3MD84_ANAVT

Accession

Primary (citable) accession number: Q3MD84

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2005
Last sequence update:	October 25, 2005
Last modified:	January 25, 2012
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)