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Protein

Glycogen synthase 1

Gene

glgA1

Organism
Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciAVAR240292:GCY3-2664-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 1UniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthase 1UniRule annotation
Gene namesi
Name:glgA1UniRule annotation
Ordered Locus Names:Ava_2631
OrganismiAnabaena variabilis (strain ATCC 29413 / PCC 7937)
Taxonomic identifieri240292 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeAnabaena
ProteomesiUP000002533: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 492492Glycogen synthase 1PRO_0000230232Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi240292.Ava_2631.

Structurei

3D structure databases

ProteinModelPortaliQ3M9U1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiLILPKYD.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3M9U1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYIVQIASEC APVIKAGGLG DVVYGLSREL EIRGNCVELI LPKYDCMRYD
60 70 80 90 100
HIWGLHEAYL NLWVPWFGAA IHCTVYCGWV HGRVCFFIEP HSEDNFFNRG
110 120 130 140 150
CYYGCDDDDM RFAFFSKAAL EFLHQSNKRP DIIHCHDWQT GLVPVMLYEI
160 170 180 190 200
YKYHGMDTQR VCYTIHNFKH QGIGGVKTLW ATGLNREAYY FQNDKLQDDF
210 220 230 240 250
NPFALNYMKG GIVYSNAVTT VSPNHALEAQ YTDVGCGLGH TLYQHKDKFS
260 270 280 290 300
GILNGIDYDF WNPEIDRYIP YNYNQEDFEQ KLYNKKALRE RLLLQAADKP
310 320 330 340 350
IIAYIGRLDN QKGVHLVHHA IYHSLNKGAQ FVLLGSATEA GINAHFRHEK
360 370 380 390 400
QFLNNNPDVH LELGFNEELS HLIYAGADMI VVPSNYEPCG LTQMIGLKYG
410 420 430 440 450
TVPIVRGVGG LVNTVFDRDY DQNLPPEKRN GYVFYQSDNQ ALESAMNRAI
460 470 480 490
DLWYQSPEKF QQLAIQGMKY DYSWNNPGKE YLDIYEWIKY KW
Length:492
Mass (Da):56,911
Last modified:October 25, 2005 - v1
Checksum:i9D278F0340F92643
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA22245.1.
RefSeqiWP_011319393.1. NC_007413.1.
YP_323140.1. NC_007413.1.

Genome annotation databases

EnsemblBacteriaiABA22245; ABA22245; Ava_2631.
GeneIDi3681914.
KEGGiava:Ava_2631.
PATRICi35426147. VBIAnaVar43351_3619.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA22245.1.
RefSeqiWP_011319393.1. NC_007413.1.
YP_323140.1. NC_007413.1.

3D structure databases

ProteinModelPortaliQ3M9U1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi240292.Ava_2631.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA22245; ABA22245; Ava_2631.
GeneIDi3681914.
KEGGiava:Ava_2631.
PATRICi35426147. VBIAnaVar43351_3619.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiLILPKYD.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciAVAR240292:GCY3-2664-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Anabaena variabilis ATCC 29413."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29413 / PCC 7937.

Entry informationi

Entry nameiGLGA1_ANAVT
AccessioniPrimary (citable) accession number: Q3M9U1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: October 25, 2005
Last modified: February 4, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.