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Q3M9U1 (GLGA1_ANAVT) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase 1

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase 1
Gene names
Name:glgA1
Ordered Locus Names:Ava_2631
OrganismAnabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]
Taxonomic identifier240292 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaNostocalesNostocaceaeAnabaena

Protein attributes

Sequence length492 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 492492Glycogen synthase 1 HAMAP-Rule MF_00484
PRO_0000230232

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q3M9U1 [UniParc].

Last modified October 25, 2005. Version 1.
Checksum: 9D278F0340F92643

FASTA49256,911
        10         20         30         40         50         60 
MYIVQIASEC APVIKAGGLG DVVYGLSREL EIRGNCVELI LPKYDCMRYD HIWGLHEAYL 

        70         80         90        100        110        120 
NLWVPWFGAA IHCTVYCGWV HGRVCFFIEP HSEDNFFNRG CYYGCDDDDM RFAFFSKAAL 

       130        140        150        160        170        180 
EFLHQSNKRP DIIHCHDWQT GLVPVMLYEI YKYHGMDTQR VCYTIHNFKH QGIGGVKTLW 

       190        200        210        220        230        240 
ATGLNREAYY FQNDKLQDDF NPFALNYMKG GIVYSNAVTT VSPNHALEAQ YTDVGCGLGH 

       250        260        270        280        290        300 
TLYQHKDKFS GILNGIDYDF WNPEIDRYIP YNYNQEDFEQ KLYNKKALRE RLLLQAADKP 

       310        320        330        340        350        360 
IIAYIGRLDN QKGVHLVHHA IYHSLNKGAQ FVLLGSATEA GINAHFRHEK QFLNNNPDVH 

       370        380        390        400        410        420 
LELGFNEELS HLIYAGADMI VVPSNYEPCG LTQMIGLKYG TVPIVRGVGG LVNTVFDRDY 

       430        440        450        460        470        480 
DQNLPPEKRN GYVFYQSDNQ ALESAMNRAI DLWYQSPEKF QQLAIQGMKY DYSWNNPGKE 

       490 
YLDIYEWIKY KW 

« Hide

References

[1]"Complete sequence of Anabaena variabilis ATCC 29413."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29413 / PCC 7937.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000117 Genomic DNA. Translation: ABA22245.1.
RefSeqYP_323140.1. NC_007413.1.

3D structure databases

ProteinModelPortalQ3M9U1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING240292.Ava_2631.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA22245; ABA22245; Ava_2631.
GeneID3681914.
KEGGava:Ava_2631.
PATRIC35426147. VBIAnaVar43351_3619.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAGMHEAYR.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycAVAR240292:GCY3-2664-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA1_ANAVT
AccessionPrimary (citable) accession number: Q3M9U1
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: October 25, 2005
Last modified: May 14, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways