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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)

Gene

Ava_2710

Organism
Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciAVAR240292:GCY3-2743-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)Imported
Gene namesi
Ordered Locus Names:Ava_2710Imported
OrganismiAnabaena variabilis (strain ATCC 29413 / PCC 7937)Imported
Taxonomic identifieri240292 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeAnabaena
ProteomesiUP000002533 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi240292.Ava_2710.

Structurei

3D structure databases

ProteinModelPortaliQ3M9L3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000136246.
OMAiQWQTIRS.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3M9L3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSISEDITD GNQAEAALRE SEAKFRSLIQ NSSDIIGIFE PDGTIRYESP
60 70 80 90 100
SVERILGYKP EELVGKNAFD FIHPDDIAGS SESFNYLIQN LGATVLVESR
110 120 130 140 150
FRRKDGSWCF LESTGSNLLA EPSVKGIVIN SRDITDRKLA EERLVHDALH
160 170 180 190 200
DVLTGLPNRV LFIDRLRRAV EYAKRYSDHL FAVLFLDLDR FKFINDSLGH
210 220 230 240 250
TIGDQLLVII AQRLIECLRP TDIAARFGGD EFIILLEGIQ DISDTVRVVE
260 270 280 290 300
RIQEKLLVPV DLSGHEIFTT ASIGISLSAT GYEQPEDLLR NADIAMYRAK
310 320 330 340 350
ARGKACYEIF NSDMHVQIVE RLQLENDLRK AIERHEFLVY YQPIVSLASG
360 370 380 390 400
RIIGFEALVR WLHPEQGIVF PEEFMPIAQE TGLIIPIDAW VLREACRQTR
410 420 430 440 450
QWQEQIPSQS VNLHQQPLSI SINLCSSRFS QKKLLEDINQ VLQDTGLDAQ
460 470 480 490 500
SLKLEITESV IMENGENATT MLYQLRNLGI ELAIDDFGTG YSSLGRLHNF
510 520 530 540 550
PINGLKIDQS FVSGRGVEAG NLHIVETIVT LSSKLGVDVT AEGVETPAQL
560 570 580
QRLRELKCEY GQGYFFSEPL DSDSAKALIM SNPQW
Length:585
Mass (Da):65,788
Last modified:October 25, 2005 - v1
Checksum:i4A9897BC4876FC47
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA22323.1.
RefSeqiWP_011319466.1. NC_007413.1.
YP_323218.1. NC_007413.1.

Genome annotation databases

EnsemblBacteriaiABA22323; ABA22323; Ava_2710.
KEGGiava:Ava_2710.
PATRICi35426315. VBIAnaVar43351_3703.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA22323.1.
RefSeqiWP_011319466.1. NC_007413.1.
YP_323218.1. NC_007413.1.

3D structure databases

ProteinModelPortaliQ3M9L3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi240292.Ava_2710.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA22323; ABA22323; Ava_2710.
KEGGiava:Ava_2710.
PATRICi35426315. VBIAnaVar43351_3703.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000136246.
OMAiQWQTIRS.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciAVAR240292:GCY3-2743-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Anabaena variabilis ATCC 29413."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29413 / PCC 7937Imported.

Entry informationi

Entry nameiQ3M9L3_ANAVT
AccessioniPrimary (citable) accession number: Q3M9L3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: October 25, 2005
Last modified: June 24, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.