Q3M898 (Q3M898_ANAVT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Type II site-specific deoxyribonuclease EMBL ABA22788.1

Gene names

Ordered Locus Names:

Ava_3180

Organism

Anabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]

Taxonomic identifier

240292 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length	315 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA restriction-modification system Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro Type II site-specific deoxyribonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3M898 [UniParc]. Last modified October 25, 2005. Version 1. Checksum: 70AFD13363C98CAD	FASTA	315	35,604
	10 20 30 40 50 60 MSYQYHLKSN HDLVTPYQEV RAGFVALALE RNRKATPFVE QARALRIRVN QIERPQDLLQ 70 80 90 100 110 120 MRDIRPTLLA ASGVSDKAAG HLQEQDKVDA IEGLIQNFLE PAGENFVEEL VYRFLLTRGD 130 140 150 160 170 180 TLGGSMRNVG GILAERKFAR YIISALTLSN TSYKWLDKNS KTWLNQPDDD TDIELGLRGL 190 200 210 220 230 240 SWNLEGRNRT FVYNVNVPIV RKNIDICLFD CRQNEIEKNI ISNPNIYIAL GELKGGIDPA 250 260 270 280 290 300 GADEHWKTAN SALARIRTAF DQHSLKPYTF FVGSAIEKSM AEEIWHQLNS GILTNAANLT 310 QPDQVASLCA WFIQI

References

[1]

"Complete sequence of Anabaena variabilis ATCC 29413." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29413 / PCC 7937.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000117 Genomic DNA. Translation: ABA22788.1.
RefSeq	YP_323683.1. NC_007413.1.
3D structure databases
ProteinModelPortal	Q3M898.
SMR	Q3M898. Positions 2-315.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3M898.
Protein family/group databases
REBASE	11387. AvaBORF3181P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3680659.
GenomeReviews	Gene locus Ava_3180 in contig CP000117_GR.
KEGG	ava:Ava_3180.
NMPDR	fig|240292.3.peg.2081.
PATRIC	35427393. VBIAnaVar43351_4232.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG87055.
HOGENOM	HBG312098.
OMA	AGADEHW.
ProtClustDB	CLSK896010.
Family and domain databases
InterPro	IPR011335. Restrct_endonuc_II-like. IPR015277. Restrct_endonuc_II_AvaI/BsoBI. IPR011544. Restrct_endonuc_II_Cfr10/BsoB1. [Graphical view]
Gene3D	G3DSA:3.40.91.10. Restrct_endonuc_II_Cfr10/BsoB1. 2 hits.
Pfam	PF09194. Endonuc-BsobI. 1 hit. [Graphical view]
ProDom	PD040871. Restrict_endonuc_II_AvaI/BsoBI. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF52980. Restrict_endonuc_II-like_core. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3M898_ANAVT

Accession

Primary (citable) accession number: Q3M898

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2005
Last sequence update:	October 25, 2005
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)