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Q3M7K6 (Q3M7K6_ANAVT) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Biosynthetic arginine decarboxylase HAMAP MF_01417
Short name=ADC HAMAP MF_01417
EC=4.1.1.19 HAMAP MF_01417
Gene names
Name:speA HAMAP MF_01417
Ordered Locus Names:Ava_3423
OrganismAnabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]
Taxonomic identifier240292 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length671 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the biosynthesis of agmatine from arginine By similarity. HAMAP MF_01417 SAAS SAAS009006

Catalytic activity

L-arginine = agmatine + CO2. HAMAP MF_01417 SAAS SAAS009006 RuleBase RU003740

Cofactor

Magnesium By similarity. HAMAP MF_01417 RuleBase RU003740 SAAS SAAS009006

Pyridoxal phosphate By similarity. HAMAP MF_01417 SAAS SAAS000183

Pathway

Amine and polyamine biosynthesis; agmatine biosynthesis; agmatine from L-arginine: step 1/1. HAMAP MF_01417

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. HAMAP MF_01417

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region323 – 33311Substrate-binding By similarity HAMAP MF_01417

Amino acid modifications

Modified residue1411N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01417

Sequences

Sequence LengthMass (Da)Tools
Q3M7K6 [UniParc].

Last modified October 25, 2005. Version 1.
Checksum: E166BA80E29AD55A

FASTA67175,725
        10         20         30         40         50         60 
MGVESTATSD EVVKVPANGN KLEGKNHKQK KLLPTNAPGD VSRAWKIEDS EALYRIEGWG 

        70         80         90        100        110        120 
QPYFSINAAG HVTVSPKGDR GGSLDLFELV NALKQRSLGL PLLIRFSDIL EDRIERLNAC 

       130        140        150        160        170        180 
FAKAIARYNY PGVYRGVFPV KCNQQRHLIE DLVRFGKPHQ FGLEAGSKPE LMIALALLDT 

       190        200        210        220        230        240 
PGSLLVCNGY KDREYVETAM LSQRLGQTPI IVLEQVEEVD LVIAASHQLG IKPILGVRAK 

       250        260        270        280        290        300 
LSTQGMGRWG TSTGDRAKFG LTIPEIIQAV DKLRDADLLD SLQLMHFHIG SQISAINVIK 

       310        320        330        340        350        360 
DAIQEASRIY VELASLGANM KYLDVGGGLG VDYDGSQTNF YASKNYNMQN YANDIVAELK 

       370        380        390        400        410        420 
DTCAEKQIPV PTLISESGRA IASHQSVLIF DVLSTSDVPR DNPEPPKEGE SPVINYLWET 

       430        440        450        460        470        480 
YQSINKENYQ EFYHDATQFK EEAISRFNLG ILRLRERAKA ERLYWACCQK ILDIIRQHDY 

       490        500        510        520        530        540 
VPDELEDLEK IMASIYYINL SVFQSAPDCW AIDQLFPIMP IHRLDEEPTQ RGILADLTCD 

       550        560        570        580        590        600 
SDGKIDRFID LRDVKSVLEL HPFQPGEPYY MGMFLNGAYQ EIMGNLHNLF GDTNAVHIQL 

       610        620        630        640        650        660 
TPKGYQIEHV VKGDTMSEVV SYVQYDSEDM VENIRQRCER ALEEKRITLA ESQRLLQTYE 

       670 
QSLRRYTYLN S

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References

[1]"Complete sequence of Anabaena variabilis ATCC 29413."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29413 / PCC 7937.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000117 Genomic DNA. Translation: ABA23030.1.
RefSeqYP_323925.1. NC_007413.1.

3D structure databases

ProteinModelPortalQ3M7K6.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3M7K6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3679949.
GenomeReviewsGene locus Ava_3423 in contig CP000117_GR.
KEGGava:Ava_3423.
NMPDRfig|240292.3.peg.3973.
PATRIC35427937. VBIAnaVar43351_4501.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1166.
HOGENOMHBG321436.
OMALICNGYK.
PhylomeDBQ3M7K6.
ProtClustDBPRK05354.

Family and domain databases

HAMAPMF_01417. SpeA.
[Tree]
InterProIPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
[Graphical view]
KOK01585.
PANTHERPTHR11482:SF3. Arg_decrbxlase. 1 hit.
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PIRSFPIRSF001336. Arg_decrbxlase. 1 hit.
PRINTSPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR01273. SpeA. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3M7K6_ANAVT
AccessionPrimary (citable) accession number: Q3M7K6
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: October 25, 2005
Last modified: December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info