Asparaginyl-tRNA synthetase, class IIb - Anabaena variabilis (strain ATCC 29413 / PCC 7937)

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Unreviewed, UniProtKB/TrEMBL Q3M700 (Q3M700_ANAVT)

Last modified March 2, 2010. Version 42. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Asparaginyl-tRNA synthetase, class IIb EMBL ABA23236.1
EC=6.1.1.22 EMBL ABA23236.1

Gene names

Ordered Locus Names:

Ava_3630

Organism

Anabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length	463 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn). Spearmint SPM004522
Sequence similarities	Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
Biological process	Protein biosynthesis Spearmint SPM004522 RuleBase RU003747V0
Cellular component	Cytoplasm Spearmint SPM004522
Ligand	ATP-binding Spearmint SPM004522 RuleBase RU003747V0 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase Spearmint SPM004522 RuleBase RU003747V0 EMBL ABA23236.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	asparaginyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro aspartyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW asparagine-tRNA ligase activity Inferred from electronic annotation. Source: EC aspartate-tRNA ligase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q3M700-1 [UniParc].

Last modified October 25, 2005. Version 1.
Checksum: B8634A75404A3C2B
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463

52,747

        10         20         30         40         50         60 
MVNRRIAEIL RSGQPDESLV VQGWVRTKRE LKGFAFIEVN DGSSLGNLQV VINQDLPDYA 

        70         80         90        100        110        120 
VIVKQLNTGA SVEVNGVLVA SQGKGQRIEL KAEAVKVYGE ADPETYPLQK KRHSFEFLRT 

       130        140        150        160        170        180 
IGHLRSRTNS FGAVFRVRNA CSAAIHQFFQ ERGFLWVHTP IITASDCEGA GELFSVTSLD 

       190        200        210        220        230        240 
LKQIPRTENQ GIDYSQDFFA KPTYLTVSGQ LEAEVMAMAF SNVYTFGPTF RAENSNTSRH 

       250        260        270        280        290        300 
LAEFWMVEPE MAFCDLEGDM DLAEAFLKHI FNHVLEKCPE DMEFFNQRID NTVLATAENI 

       310        320        330        340        350        360 
INNQFERLTY TDAIKLLEKA DVKFEYPVSW GLDLQSEHER YLAEQLFKKP VIVTDYPAQI 

       370        380        390        400        410        420 
KAFYMRLSDD EKTVRAMDVL APKIGEIIGG SQREERLDVL ERRILAQGMQ PEDLWWYLDL 

       430        440        450        460 
RRYGTVPHAG FGLGFERLVQ FITGMGNIRD VIPFPRTPQN AEF

References

[1]

"Complete sequence of Anabaena variabilis ATCC 29413."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000117 Genomic DNA. Translation: ABA23236.1.
RefSeq	YP_324131.1.
3D structure databases
SMR	Q3M700. Positions 1-461.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3M700.
Genome annotation databases
GeneID	3679264.
GenomeReviews	Gene locus Ava_3630 in contig CP000117_GR.
KEGG	ava:Ava_3630.
NMPDR	fig\|240292.3.peg.4647.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0017.
HOGENOM	HBG745843.
OMA	LQKKRHS.
PhylomeDB	Q3M700.
ProtClustDB	PRK03932.
Enzyme and pathway databases
BioCyc	AVAR240292:AVA_3630-MONOMER.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II_cons-dom. IPR004522. Asn-tRNA-synth_IIb. IPR002312. Asp-tRNA-synth_IIb. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA_bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00457. asnS. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3M700_ANAVT

Accession

Primary (citable) accession number: Q3M700

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2005
Last sequence update:	October 25, 2005
Last modified:	March 2, 2010
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information