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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)

Gene

Ava_3868

Organism
Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorelay sensor kinase activity Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAVAR240292:GCY3-3916-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)Imported
Gene namesi
Ordered Locus Names:Ava_3868Imported
OrganismiAnabaena variabilis (strain ATCC 29413 / PCC 7937)Imported
Taxonomic identifieri240292 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeAnabaena
ProteomesiUP000002533 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi240292.Ava_3868.

Structurei

3D structure databases

ProteinModelPortaliQ3M6B3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000058674.
OMAiDSISECE.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF08447. PAS_3. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 3 hits.
PS50112. PAS. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3M6B3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVFTRGKVYK NHLDLQKNKG FPTPTKDSIS ECEAGNSDFT PEFQSYEKSI
60 70 80 90 100
LDLQEIINLL AEINPFPVAI IGLESHQILF KNKLVDNPVL QQLIPDFLAD
110 120 130 140 150
SDLWTQLNSK LVNGNFIRKL ALEIKSSNEN RFLAIISGKL VNYEHERAAF
160 170 180 190 200
LVFTDVNTVI GASEEQQKDT LEKPELSNLI TDTSDSQRLP TIKHSPWPAP
210 220 230 240 250
SHLMEQALAA ISNGIVLTDA NQPDNPIIYV NQAFEAMTGY SAGEVIGQNC
260 270 280 290 300
RFLQANETDQ LSLSELRSAL QEKKECHVVI KNFRKDGTEF WNELYIAPVF
310 320 330 340 350
DSCGQLTHFI GVQNDITHHL QALETLQEQK EQYRRIVETA SEGIWLLNEN
360 370 380 390 400
NETTFVNQQM ASMLGYTIEE MLGASLFSFM DAEGLDIAQD LLLGRQQDIQ
410 420 430 440 450
EKHNFKFRCK DGSDLWAILS CTPFLDEQGN YTGALGMLTN ISDVYDELRL
460 470 480 490 500
RKQAEASLQE SKERLDGILN SLEVVIWSIA ADTFEMLYLN SAVVQVYGRS
510 520 530 540 550
VCEFYDNSKL WFELIHPEDQ QRVSQSIKPL LANGSHELEY RILRQDGQVR
560 570 580 590 600
WLYNHSHVIY DAVGQPIRIE GVATDITERK NMEERLVYHA FYDDLTGLPN
610 620 630 640 650
RVLFMDRLAQ TINQAKESPN DLFAVLFLDL DRFKVVNDSL SHLVGDQLLV
660 670 680 690 700
SFAQRLQSCL QPEDTLARLG GDEFTILLSH IQSIDDATRI AEKIHQALKL
710 720 730 740 750
PFNLSGYEVF TTVSIGIALS SNDYVQAADL LRDADTALYC AKEQGKAWHI
760 770 780 790 800
VFDSTMYDRA VALLQLETDL RWAIARQELY VVYQPIVSVA TGKITGFEAL
810 820 830 840 850
VRWEHPERGL ISPVEFIPVA EETGLIIQIG QFVLRESCQQ LKQWHLEFPE
860 870 880 890 900
FQHLSINVNL SGKQFSQPYL VEEIEQLLQE FELDANSIKL EITESAIMAS
910 920 930 940 950
PEQAATILQQ LKTLGIQLCI DDFGTGYSSL AYLHCFPIDI LKIDRSFTKR
960 970 980 990 1000
IDSDSEQLAI IRAIVTLASN LEMSVVAEGV ETVNQLVQLQ LLKCDQAQGY
1010 1020
LFSKPLSSDK VSLLLAAKTQ Y
Length:1,021
Mass (Da):115,525
Last modified:October 25, 2005 - v1
Checksum:i1DBA73AD8D3A66DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA23473.1.
RefSeqiWP_011320563.1. NC_007413.1.
YP_324368.1. NC_007413.1.

Genome annotation databases

EnsemblBacteriaiABA23473; ABA23473; Ava_3868.
KEGGiava:Ava_3868.
PATRICi35428965. VBIAnaVar43351_5013.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000117 Genomic DNA. Translation: ABA23473.1.
RefSeqiWP_011320563.1. NC_007413.1.
YP_324368.1. NC_007413.1.

3D structure databases

ProteinModelPortaliQ3M6B3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi240292.Ava_3868.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA23473; ABA23473; Ava_3868.
KEGGiava:Ava_3868.
PATRICi35428965. VBIAnaVar43351_5013.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000058674.
OMAiDSISECE.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciAVAR240292:GCY3-3916-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF08447. PAS_3. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 3 hits.
PS50112. PAS. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Anabaena variabilis ATCC 29413."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29413 / PCC 7937Imported.

Entry informationi

Entry nameiQ3M6B3_ANAVT
AccessioniPrimary (citable) accession number: Q3M6B3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2005
Last sequence update: October 25, 2005
Last modified: April 1, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.